RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SRCIN1Q9C0H9 1055 aa14.87□□□□□ -0.03
SOD1-202ENST00000389995 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.87□□□□□ -0.03
SOD1-202ENST00000389995 FAM198AQ9UFP1 575 aa14.87□□□□□ -0.03
SOD1-202ENST00000389995 ZMYND8Q9ULU4 1186 aaPredicted RBP14.87□□□□□ -0.03
SOD1-202ENST00000389995 DAGLAQ9Y4D2 1042 aa14.87□□□□□ -0.03
SOD1-202ENST00000389995 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
SOD1-202ENST00000389995 A0A1W2PPC1 479 aa14.86□□□□□ -0.03
SOD1-202ENST00000389995 ALDH1L1O75891 902 aa14.86□□□□□ -0.03
SOD1-202ENST00000389995 NOL9Q5SY16 702 aaKnown RBP14.86□□□□□ -0.03
SOD1-202ENST00000389995 C7orf61Q8IZ16 206 aa14.86□□□□□ -0.03
SOD1-202ENST00000389995 ANKRD44Q8N8A2 993 aa14.86□□□□□ -0.03
SOD1-202ENST00000389995 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
SOD1-202ENST00000389995 MAST3O60307 1309 aa14.86□□□□□ -0.03
SOD1-202ENST00000389995 TNPO2O14787 897 aaKnown RBP14.85□□□□□ -0.03
SOD1-202ENST00000389995 SYN1P17600 705 aa14.85□□□□□ -0.03
SOD1-202ENST00000389995 CCDC84Q86UT8 332 aaPredicted RBP14.85□□□□□ -0.03
SOD1-202ENST00000389995 DEFB123Q8N688 67 aa14.85□□□□□ -0.03
SOD1-202ENST00000389995 PAK6Q9NQU5 681 aaPredicted RBP14.85□□□□□ -0.03
SOD1-202ENST00000389995 A0A0G2JLL6 359 aaPredicted RBP14.84□□□□□ -0.03
SOD1-202ENST00000389995 PHF20L1A8MW92 1017 aa14.84□□□□□ -0.03
SOD1-202ENST00000389995 CXCL11O14625 94 aa14.84□□□□□ -0.03
SOD1-202ENST00000389995 PRDX5P30044 214 aa14.84□□□□□ -0.03
SOD1-202ENST00000389995 PRRT2Q7Z6L0 340 aaPredicted RBP14.84□□□□□ -0.03
SOD1-202ENST00000389995 GDF15Q99988 308 aa14.84□□□□□ -0.03
SOD1-202ENST00000389995 USP40Q9NVE5 1235 aa14.84□□□□□ -0.03
SOD1-202ENST00000389995 PTPRAP18433 802 aa14.83□□□□□ -0.04
SOD1-202ENST00000389995 FGFR2P21802 821 aa14.83□□□□□ -0.04
SOD1-202ENST00000389995 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
SOD1-202ENST00000389995 RABL6Q3YEC7 729 aaPredicted RBP14.83□□□□□ -0.04
SOD1-202ENST00000389995 ANKRD13CQ8N6S4 541 aa14.83□□□□□ -0.04
SOD1-202ENST00000389995 PXYLP1Q8TE99 480 aa14.83□□□□□ -0.04
SOD1-202ENST00000389995 CRISPLD2Q9H0B8 497 aa14.83□□□□□ -0.04
SOD1-202ENST00000389995 SUGT1Q9Y2Z0 365 aa14.83□□□□□ -0.04
SOD1-202ENST00000389995 AFG3L2Q9Y4W6 797 aa14.83□□□□□ -0.04
SOD1-202ENST00000389995 TRIM75PA6NK02 468 aa14.82□□□□□ -0.04
SOD1-202ENST00000389995 IFIT1P09914 478 aaKnown RBP14.82□□□□□ -0.04
SOD1-202ENST00000389995 ZEB1P37275 1124 aaPredicted RBP14.82□□□□□ -0.04
SOD1-202ENST00000389995 TRIM32Q13049 653 aa14.82□□□□□ -0.04
SOD1-202ENST00000389995 PUM3Q15397 648 aaKnown RBP14.82□□□□□ -0.04
SOD1-202ENST00000389995 SH3BP5LQ7L8J4 393 aa14.82□□□□□ -0.04
SOD1-202ENST00000389995 FASTKD5Q7L8L6 764 aaKnown RBP14.82□□□□□ -0.04
SOD1-202ENST00000389995 NECAB2Q7Z6G3 386 aa14.82□□□□□ -0.04
SOD1-202ENST00000389995 SCYL3Q8IZE3 742 aa14.82□□□□□ -0.04
SOD1-202ENST00000389995 SMCR8Q8TEV9 937 aaPredicted RBP14.82□□□□□ -0.04
SOD1-202ENST00000389995 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.046e-7■■■□□ 18.5
SOD1-202ENST00000389995 PICK1Q9NRD5 415 aa14.82□□□□□ -0.04
SOD1-202ENST00000389995 ATRNL1Q5VV63 1379 aa14.82□□□□□ -0.04
SOD1-202ENST00000389995 LOC285556D6RIA3 1793 aa14.81□□□□□ -0.04
SOD1-202ENST00000389995 RGS3P49796 1198 aa14.81□□□□□ -0.04
SOD1-202ENST00000389995 IRF5Q13568 498 aa14.81□□□□□ -0.04
SOD1-202ENST00000389995 TREML2Q5T2D2 321 aa14.81□□□□□ -0.04
SOD1-202ENST00000389995 WDR66Q8TBY9 1149 aa14.81□□□□□ -0.04
SOD1-202ENST00000389995 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
SOD1-202ENST00000389995 UTYO14607 1347 aa14.81□□□□□ -0.04
SOD1-202ENST00000389995 BMP8BP34820 402 aa14.8□□□□□ -0.04
SOD1-202ENST00000389995 MAGEA10P43363 369 aaPredicted RBP14.8□□□□□ -0.04
SOD1-202ENST00000389995 ZSCAN29Q8IWY8 852 aaPredicted RBP14.8□□□□□ -0.04
SOD1-202ENST00000389995 DDTLA6NHG4 134 aaPredicted RBP14.79□□□□□ -0.04
SOD1-202ENST00000389995 LDHBP07195 334 aaKnown RBP14.79□□□□□ -0.04
SOD1-202ENST00000389995 SLC5A1P13866 664 aa14.79□□□□□ -0.04
SOD1-202ENST00000389995 FRMPD3Q5JV73 1810 aa14.79□□□□□ -0.04
SOD1-202ENST00000389995 WDR63Q8IWG1 891 aa14.79□□□□□ -0.04
SOD1-202ENST00000389995 COA7Q96BR5 231 aa14.79□□□□□ -0.04
SOD1-202ENST00000389995 SPTBN5Q9NRC6 3674 aaKnown RBP14.79□□□□□ -0.04
SOD1-202ENST00000389995 MTMR10Q9NXD2 777 aa14.79□□□□□ -0.04
SOD1-202ENST00000389995 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
SOD1-202ENST00000389995 KIF16BQ96L93 1317 aa14.78□□□□□ -0.04
SOD1-202ENST00000389995 FAM196BA6NMK8 535 aa14.78□□□□□ -0.04
SOD1-202ENST00000389995 COL25A1Q9BXS0 654 aaPredicted RBP14.78□□□□□ -0.04
SOD1-202ENST00000389995 DDX4Q9NQI0 724 aaKnown RBP14.78□□□□□ -0.04
SOD1-202ENST00000389995 STXBP5LQ9Y2K9 1186 aa14.78□□□□□ -0.04
SOD1-202ENST00000389995 CDH23Q9H251 3354 aa14.77□□□□□ -0.04
SOD1-202ENST00000389995 PEX10O60683 326 aa14.77□□□□□ -0.05
SOD1-202ENST00000389995 RFX5P48382 616 aaPredicted RBP14.77□□□□□ -0.05
SOD1-202ENST00000389995 PICALMQ13492 652 aa14.77□□□□□ -0.05
SOD1-202ENST00000389995 LPIN2Q92539 896 aa14.77□□□□□ -0.05
SOD1-202ENST00000389995 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.05
SOD1-202ENST00000389995 SLC45A1Q9Y2W3 748 aa14.77□□□□□ -0.05
SOD1-202ENST00000389995 EYA2O00167 538 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 HMGCRP04035 888 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 PHKA1P46020 1223 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 LRIT3Q3SXY7 679 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 GPR153Q6NV75 609 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 ATG9AQ7Z3C6 839 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 UBE2OQ9C0C9 1292 aaKnown RBP14.76□□□□□ -0.05
SOD1-202ENST00000389995 NBPF3Q9H094 633 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 SIL1Q9H173 461 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 C11orf49Q9H6J7 331 aa14.76□□□□□ -0.05
SOD1-202ENST00000389995 RFX7Q2KHR2 1363 aa14.75□□□□□ -0.05
SOD1-202ENST00000389995 CTNND1O60716 968 aaKnown RBP14.75□□□□□ -0.05
SOD1-202ENST00000389995 ENTPD3O75355 529 aa14.75□□□□□ -0.05
SOD1-202ENST00000389995 FAM110CQ1W6H9 321 aa14.75□□□□□ -0.05
SOD1-202ENST00000389995 IDI2Q9BXS1 227 aa14.75□□□□□ -0.05
SOD1-202ENST00000389995 USP44Q9H0E7 712 aa14.75□□□□□ -0.05
SOD1-202ENST00000389995 HMX1Q9NP08 348 aaPredicted RBP14.75□□□□□ -0.05
SOD1-202ENST00000389995 GJD2Q9UKL4 321 aa14.75□□□□□ -0.05
SOD1-202ENST00000389995 CDK5RAP2Q96SN8 1893 aa14.74□□□□□ -0.05
SOD1-202ENST00000389995 PFASO15067 1338 aa14.74□□□□□ -0.05
SOD1-202ENST00000389995 RPTORQ8N122 1335 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms