RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RABGGTAQ92696 567 aa16.12■□□□□ 0.17
RTF1-201ENST00000389629 USP6P35125 1406 aa16.12■□□□□ 0.17
RTF1-201ENST00000389629 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
RTF1-201ENST00000389629 CMA1P23946 247 aa16.12■□□□□ 0.17
RTF1-201ENST00000389629 ADD1P35611 737 aaKnown RBP16.12■□□□□ 0.17
RTF1-201ENST00000389629 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
RTF1-201ENST00000389629 PSMB7Q99436 277 aa16.12■□□□□ 0.17
RTF1-201ENST00000389629 CHD1O14646 1710 aa16.12■□□□□ 0.17
RTF1-201ENST00000389629 CTIFO43310 598 aaKnown RBP16.12■□□□□ 0.17
RTF1-201ENST00000389629 MAP2K2P36507 400 aa16.12■□□□□ 0.17
RTF1-201ENST00000389629 DIS3L2Q8IYB7 885 aaKnown RBP16.12■□□□□ 0.17
RTF1-201ENST00000389629 TACC1O75410 805 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 IDEP14735 1019 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 LTKP29376 864 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 UBA7P41226 1012 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 SARM1Q6SZW1 724 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 HELBQ8NG08 1087 aaPredicted RBP16.11■□□□□ 0.17
RTF1-201ENST00000389629 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
RTF1-201ENST00000389629 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 GOLGA6BA6NDN3 693 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 KRT83P78385 493 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 RGS22Q8NE09 1264 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 FBXO18Q8NFZ0 1043 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 APPBP2Q92624 585 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 XAGE2Q96GT9 111 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 CCDC42Q96M95 316 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 GOLPH3LQ9H4A5 285 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
RTF1-201ENST00000389629 ROBO2Q9HCK4 1378 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 A0A1W2PQ27 194 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 A0A1W2PQ64 194 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 POSTNQ15063 836 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 STAMQ92783 540 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 ADAM21Q9UKJ8 722 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 CCDC194A0A1B0GVG4 234 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 AP5Z1O43299 807 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 SLFN14P0C7P3 912 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 KRT9P35527 623 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 NOP2P46087 812 aaKnown RBP16.11■□□□□ 0.17
RTF1-201ENST00000389629 SOGA3Q5TF21 947 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 MLKLQ8NB16 471 aa16.11■□□□□ 0.17
RTF1-201ENST00000389629 PPRC1Q5VV67 1664 aaKnown RBP16.11■□□□□ 0.17
RTF1-201ENST00000389629 HPDP32754 393 aaPredicted RBP16.1■□□□□ 0.17
RTF1-201ENST00000389629 MYCBPQ99417 103 aaPredicted RBP16.1■□□□□ 0.17
RTF1-201ENST00000389629 CNNM2Q9H8M5 875 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 CARMIL3Q8ND23 1372 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
RTF1-201ENST00000389629 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 KCNJ14Q9UNX9 436 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 JRKLQ9Y4A0 524 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 SND1Q7KZF4 910 aaKnown RBP eCLIP16.1■□□□□ 0.17
RTF1-201ENST00000389629 LINC00301Q8NCQ3 95 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 TBX22Q9Y458 520 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 CFAP58Q5T655 872 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 MYOM1P52179 1685 aa16.1■□□□□ 0.17
RTF1-201ENST00000389629 ZAP70P43403 619 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 SERTAD1Q9UHV2 236 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 CTNND2Q9UQB3 1225 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 VAV2P52735 878 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 TTC19Q6DKK2 380 aaPredicted RBP16.09■□□□□ 0.17
RTF1-201ENST00000389629 COPRSQ9NQ92 184 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 CCT5P48643 541 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
RTF1-201ENST00000389629 SLC4A8Q2Y0W8 1093 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 SLFNL1Q499Z3 407 aa16.09■□□□□ 0.17
RTF1-201ENST00000389629 NAA25Q14CX7 972 aa16.08■□□□□ 0.17
RTF1-201ENST00000389629 EXOC4Q96A65 974 aa16.08■□□□□ 0.17
RTF1-201ENST00000389629 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.17
RTF1-201ENST00000389629 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.17
RTF1-201ENST00000389629 PHLPP2Q6ZVD8 1323 aa16.08■□□□□ 0.17
RTF1-201ENST00000389629 VWA3AA6NCI4 1184 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 ATP8B1O43520 1251 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 NEFHP12036 1026 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 STAT6P42226 847 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.16
RTF1-201ENST00000389629 BCAS4Q8TDM0 211 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 TAB2Q9NYJ8 693 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 G3V3G9 751 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 DCAF8Q5TAQ9 597 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
RTF1-201ENST00000389629 TMTC2Q8N394 836 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 MAGEB6Q8N7X4 407 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 PLIN2Q99541 437 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 GPHNQ9NQX3 736 aaPredicted RBP16.08■□□□□ 0.16
RTF1-201ENST00000389629 CAPN7Q9Y6W3 813 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 CRB1P82279 1406 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 FGAP02671 866 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 RNASE9P60153 205 aaKnown RBP16.08■□□□□ 0.16
RTF1-201ENST00000389629 ZNF174Q15697 407 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 CABLES1Q8TDN4 633 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 RMND1Q9NWS8 449 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms