RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 MCM9Q9NXL9 1143 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 SCNN1DP51172 638 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 DCP1AQ9NPI6 582 aaPredicted RBP11.9□□□□□ -0.5
LTN1-203ENST00000389195 XDHP47989 1333 aa11.9□□□□□ -0.51
LTN1-203ENST00000389195 PNPLA7Q6ZV29 1317 aa11.9□□□□□ -0.51
LTN1-203ENST00000389195 MYH2Q9UKX2 1941 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 LDHBP07195 334 aaKnown RBP11.89□□□□□ -0.51
LTN1-203ENST00000389195 VEGFAP15692 232 aaPredicted RBP11.89□□□□□ -0.51
LTN1-203ENST00000389195 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 SLC26A6Q9BXS9 759 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 DBNDD1Q9H9R9 158 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 KCNJ14Q9UNX9 436 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 ADRA2BP18089 450 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 ATP2B1P20020 1258 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 PLCD1P51178 756 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 MFSD14BQ5SR56 506 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 LEO1Q8WVC0 666 aaPredicted RBP11.89□□□□□ -0.51
LTN1-203ENST00000389195 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 CACNA1SQ13698 1873 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 SALL1Q9NSC2 1324 aa11.89□□□□□ -0.51
LTN1-203ENST00000389195 GOLGA8AA7E2F4 631 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 ZBTB43O43298 467 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 KRT85P78386 507 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 RBM17Q96I25 401 aaKnown RBP11.88□□□□□ -0.51
LTN1-203ENST00000389195 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 CCDC69A6NI79 296 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 NR1I2O75469 434 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 PDCP20941 246 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 TNKSO95271 1327 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 SRGNP10124 158 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
LTN1-203ENST00000389195 CACNB3P54284 484 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 PICALMQ13492 652 aa11.88□□□□□ -0.51
LTN1-203ENST00000389195 TDRD7Q8NHU6 1098 aaKnown RBP11.88□□□□□ -0.51
LTN1-203ENST00000389195 A0A1B0GUL6 1792 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
LTN1-203ENST00000389195 USP5P45974 858 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 MRE11P49959 708 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 UBE2HP62256 183 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 WTAPQ15007 396 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 ENAHQ8N8S7 591 aaPredicted RBP11.87□□□□□ -0.51
LTN1-203ENST00000389195 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 MARCKSP29966 332 aaPredicted RBP11.87□□□□□ -0.51
LTN1-203ENST00000389195 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 UBAC1Q9BSL1 405 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
LTN1-203ENST00000389195 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 ADAMTS3O15072 1205 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 PLEKHA8P1O95397 391 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 ALX1Q15699 326 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 NTRK3Q16288 839 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 CLEC10AQ8IUN9 316 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 STAG1Q8WVM7 1258 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 CHD4Q14839 1912 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
LTN1-203ENST00000389195 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
LTN1-203ENST00000389195 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 CERS5Q8N5B7 392 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 SCAF8Q9UPN6 1271 aaKnown RBP11.86□□□□□ -0.51
LTN1-203ENST00000389195 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 MRVI1Q9Y6F6 885 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 DOCK2Q92608 1830 aa11.86□□□□□ -0.51
LTN1-203ENST00000389195 PLSCR1O15162 318 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 BTDP43251 543 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 EVCP57679 992 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 SHISA4Q96DD7 197 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 LEMD3Q9Y2U8 911 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 MBD3O95983 291 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 GNAT2P19087 354 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 ME1P48163 572 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 ZNF445P59923 1031 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 NR5A1Q13285 461 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 LRSAM1Q6UWE0 723 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 NBPF11Q86T75 865 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 FBXO18Q8NFZ0 1043 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 OXER1Q8TDS5 423 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 GOLPH3LQ9H4A5 285 aa11.85□□□□□ -0.51
LTN1-203ENST00000389195 A0A1B0GVL5 298 aa11.84□□□□□ -0.51
LTN1-203ENST00000389195 IARSP41252 1262 aaKnown RBP11.84□□□□□ -0.51
LTN1-203ENST00000389195 EIF6P56537 245 aaKnown RBP11.84□□□□□ -0.51
LTN1-203ENST00000389195 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
LTN1-203ENST00000389195 LLPHQ9BRT6 129 aaKnown RBP11.84□□□□□ -0.51
LTN1-203ENST00000389195 KRT23Q9C075 422 aa11.84□□□□□ -0.51
LTN1-203ENST00000389195 ZMYM6O95789 1325 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms