RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 PHIPQ8WWQ0 1821 aa26.74■■□□□ 1.87
CNEP1R1-201ENST00000389134 INHAP05111 366 aa26.74■■□□□ 1.87
CNEP1R1-201ENST00000389134 SCYL3Q8IZE3 742 aa26.74■■□□□ 1.87
CNEP1R1-201ENST00000389134 PHF20L1A8MW92 1017 aa26.73■■□□□ 1.87
CNEP1R1-201ENST00000389134 LDHBP07195 334 aaKnown RBP26.73■■□□□ 1.87
CNEP1R1-201ENST00000389134 ELNP15502 786 aa26.73■■□□□ 1.87
CNEP1R1-201ENST00000389134 DEFB118Q96PH6 123 aa26.73■■□□□ 1.87
CNEP1R1-201ENST00000389134 AFG3L2Q9Y4W6 797 aa26.73■■□□□ 1.87
CNEP1R1-201ENST00000389134 DOCK1Q14185 1865 aa26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 EYA2O00167 538 aa26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 TNPO2O14787 897 aaKnown RBP26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 PTPRAP18433 802 aa26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 PRDX5P30044 214 aa26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 GADL1Q6ZQY3 521 aa26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 MRS2Q9HD23 443 aa26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 PAK6Q9NQU5 681 aaPredicted RBP26.72■■□□□ 1.87
CNEP1R1-201ENST00000389134 SOX1O00570 391 aaPredicted RBP26.71■■□□□ 1.87
CNEP1R1-201ENST00000389134 ZFPM1Q8IX07 1006 aa26.71■■□□□ 1.87
CNEP1R1-201ENST00000389134 CRISPLD2Q9H0B8 497 aa26.71■■□□□ 1.87
CNEP1R1-201ENST00000389134 GNL3LQ9NVN8 582 aaKnown RBP26.71■■□□□ 1.87
CNEP1R1-201ENST00000389134 STAP2Q9UGK3 403 aa26.71■■□□□ 1.87
CNEP1R1-201ENST00000389134 ATRNL1Q5VV63 1379 aa26.71■■□□□ 1.87
CNEP1R1-201ENST00000389134 SMCR8Q8TEV9 937 aaPredicted RBP26.7■■□□□ 1.86
CNEP1R1-201ENST00000389134 SALL1Q9NSC2 1324 aa26.69■■□□□ 1.86
CNEP1R1-201ENST00000389134 ENTPD3O75355 529 aa26.69■■□□□ 1.86
CNEP1R1-201ENST00000389134 COA7Q96BR5 231 aa26.69■■□□□ 1.86
CNEP1R1-201ENST00000389134 LRCH3Q96II8 777 aa26.69■■□□□ 1.86
CNEP1R1-201ENST00000389134 IDI2Q9BXS1 227 aa26.69■■□□□ 1.86
CNEP1R1-201ENST00000389134 LRRFIP2Q9Y608 721 aaKnown RBP26.69■■□□□ 1.86
CNEP1R1-201ENST00000389134 RGS3P49796 1198 aa26.68■■□□□ 1.86
CNEP1R1-201ENST00000389134 MAP3K10Q02779 954 aa26.68■■□□□ 1.86
CNEP1R1-201ENST00000389134 NECAB2Q7Z6G3 386 aa26.68■■□□□ 1.86
CNEP1R1-201ENST00000389134 PAWRQ96IZ0 340 aaKnown RBP26.68■■□□□ 1.86
CNEP1R1-201ENST00000389134 USP44Q9H0E7 712 aa26.68■■□□□ 1.86
CNEP1R1-201ENST00000389134 CTNND1O60716 968 aaKnown RBP26.67■■□□□ 1.86
CNEP1R1-201ENST00000389134 RFX5P48382 616 aaPredicted RBP26.67■■□□□ 1.86
CNEP1R1-201ENST00000389134 ZSCAN29Q8IWY8 852 aaPredicted RBP26.67■■□□□ 1.86
CNEP1R1-201ENST00000389134 PTPRCP08575 1304 aa26.66■■□□□ 1.86
CNEP1R1-201ENST00000389134 SEMA3EO15041 775 aa26.66■■□□□ 1.86
CNEP1R1-201ENST00000389134 BMP8BP34820 402 aa26.66■■□□□ 1.86
CNEP1R1-201ENST00000389134 GPR153Q6NV75 609 aa26.66■■□□□ 1.86
CNEP1R1-201ENST00000389134 TAOK2Q9UL54 1235 aa26.66■■□□□ 1.86
CNEP1R1-201ENST00000389134 DENND2AQ9ULE3 1009 aa26.66■■□□□ 1.86
CNEP1R1-201ENST00000389134 ATG9AQ7Z3C6 839 aa26.65■■□□□ 1.86
CNEP1R1-201ENST00000389134 ZGPATQ8N5A5 531 aaKnown RBP26.65■■□□□ 1.86
CNEP1R1-201ENST00000389134 MRPL50Q8N5N7 158 aaKnown RBP26.65■■□□□ 1.86
CNEP1R1-201ENST00000389134 ANKLE1Q8NAG6 615 aa26.65■■□□□ 1.86
CNEP1R1-201ENST00000389134 FBXO3Q9UK99 471 aa26.65■■□□□ 1.86
CNEP1R1-201ENST00000389134 AGTPBP1Q9UPW5 1226 aa26.65■■□□□ 1.86
CNEP1R1-201ENST00000389134 ATP2B3Q16720 1220 aa26.64■■□□□ 1.86
CNEP1R1-201ENST00000389134 FAM110CQ1W6H9 321 aa26.64■■□□□ 1.86
CNEP1R1-201ENST00000389134 ANKRD13CQ8N6S4 541 aa26.64■■□□□ 1.86
CNEP1R1-201ENST00000389134 GDF15Q99988 308 aa26.64■■□□□ 1.86
CNEP1R1-201ENST00000389134 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.64■■□□□ 1.86
CNEP1R1-201ENST00000389134 PNMA3Q9UL41 463 aa26.64■■□□□ 1.86
CNEP1R1-201ENST00000389134 TRIM75PA6NK02 468 aa26.63■■□□□ 1.85
CNEP1R1-201ENST00000389134 MNX1P50219 401 aaPredicted RBP26.63■■□□□ 1.85
CNEP1R1-201ENST00000389134 SH3BP5LQ7L8J4 393 aa26.63■■□□□ 1.85
CNEP1R1-201ENST00000389134 CEP126Q9P2H0 1117 aa26.63■■□□□ 1.85
CNEP1R1-201ENST00000389134 GAKO14976 1311 aa26.63■■□□□ 1.85
CNEP1R1-201ENST00000389134 ZBTB22O15209 634 aa26.62■■□□□ 1.85
CNEP1R1-201ENST00000389134 SLF2Q8IX21 1173 aa26.62■■□□□ 1.85
CNEP1R1-201ENST00000389134 RFX7Q2KHR2 1363 aa26.61■■□□□ 1.85
CNEP1R1-201ENST00000389134 CIAO1O76071 339 aa26.61■■□□□ 1.85
CNEP1R1-201ENST00000389134 DIS3LQ8TF46 1054 aaKnown RBP26.61■■□□□ 1.85
CNEP1R1-201ENST00000389134 ATAD5Q96QE3 1844 aa26.6■■□□□ 1.85
CNEP1R1-201ENST00000389134 DDTLA6NHG4 134 aaPredicted RBP26.6■■□□□ 1.85
CNEP1R1-201ENST00000389134 PROCA1Q8NCQ7 364 aaPredicted RBP26.6■■□□□ 1.85
CNEP1R1-201ENST00000389134 FAM163AQ96GL9 167 aaPredicted RBP26.6■■□□□ 1.85
CNEP1R1-201ENST00000389134 LOC285556D6RIA3 1793 aa26.59■■□□□ 1.85
CNEP1R1-201ENST00000389134 HMGCRP04035 888 aa26.59■■□□□ 1.85
CNEP1R1-201ENST00000389134 PHKA1P46020 1223 aa26.59■■□□□ 1.85
CNEP1R1-201ENST00000389134 GCLCP48506 637 aaPredicted RBP26.59■■□□□ 1.85
CNEP1R1-201ENST00000389134 DZIP1Q86YF9 867 aaKnown RBP26.59■■□□□ 1.85
CNEP1R1-201ENST00000389134 C7orf61Q8IZ16 206 aa26.59■■□□□ 1.85
CNEP1R1-201ENST00000389134 TBC1D12O60347 775 aa26.58■■□□□ 1.85
CNEP1R1-201ENST00000389134 TREML2Q5T2D2 321 aa26.58■■□□□ 1.85
CNEP1R1-201ENST00000389134 DEFB123Q8N688 67 aa26.58■■□□□ 1.85
CNEP1R1-201ENST00000389134 NBPF3Q9H094 633 aa26.58■■□□□ 1.85
CNEP1R1-201ENST00000389134 SIL1Q9H173 461 aa26.58■■□□□ 1.85
CNEP1R1-201ENST00000389134 DDX60LQ5H9U9 1706 aaKnown RBP26.58■■□□□ 1.85
CNEP1R1-201ENST00000389134 RPTORQ8N122 1335 aa26.58■■□□□ 1.85
CNEP1R1-201ENST00000389134 HMX1Q9NP08 348 aaPredicted RBP26.57■■□□□ 1.84
CNEP1R1-201ENST00000389134 DDX4Q9NQI0 724 aaKnown RBP26.57■■□□□ 1.84
CNEP1R1-201ENST00000389134 ZMYND8Q9ULU4 1186 aaPredicted RBP26.57■■□□□ 1.84
CNEP1R1-201ENST00000389134 SLURP2P0DP57 97 aa26.56■■□□□ 1.84
CNEP1R1-201ENST00000389134 PABPC4Q13310 644 aaKnown RBP eCLIP26.56■■□□□ 1.84
CNEP1R1-201ENST00000389134 PICALMQ13492 652 aa26.56■■□□□ 1.84
CNEP1R1-201ENST00000389134 LRIT3Q3SXY7 679 aa26.56■■□□□ 1.84
CNEP1R1-201ENST00000389134 SPTY2D1Q68D10 685 aaPredicted RBP26.56■■□□□ 1.84
CNEP1R1-201ENST00000389134 TBC1D2Q9BYX2 928 aa26.56■■□□□ 1.84
CNEP1R1-201ENST00000389134 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.56■■□□□ 1.84
CNEP1R1-201ENST00000389134 PLXNB2O15031 1838 aa26.55■■□□□ 1.84
CNEP1R1-201ENST00000389134 BTDP43251 543 aa26.55■■□□□ 1.84
CNEP1R1-201ENST00000389134 CCDC102BQ68D86 513 aa26.55■■□□□ 1.84
CNEP1R1-201ENST00000389134 CCDC84Q86UT8 332 aaPredicted RBP26.55■■□□□ 1.84
CNEP1R1-201ENST00000389134 OSBPL5Q9H0X9 879 aaPredicted RBP26.55■■□□□ 1.84
CNEP1R1-201ENST00000389134 ABCF2Q9UG63 623 aa26.55■■□□□ 1.84
CNEP1R1-201ENST00000389134 UNC80Q8N2C7 3258 aa26.55■■□□□ 1.84
CNEP1R1-201ENST00000389134 NPM3O75607 178 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms