RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 BHLHE22Q8NFJ8 381 aaPredicted RBP1.32□□□□□ -2.2
SNORD28-201ENST00000384706 ASB11Q8WXH4 323 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 DIRC2Q96SL1 478 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 PPP1R16BQ96T49 567 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 TCF12Q99081 682 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 DUSP23Q9BVJ7 150 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 EHD4Q9H223 541 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 ATXN3LQ9H3M9 355 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 CCDC86Q9H6F5 360 aaKnown RBP1.32□□□□□ -2.2
SNORD28-201ENST00000384706 KCNK12Q9HB15 430 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 ANO2Q9NQ90 1003 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 DISC1Q9NRI5 854 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 LMCD1Q9NZU5 365 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 PCOLCE2Q9UKZ9 415 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 PLAGL2Q9UPG8 496 aa1.32□□□□□ -2.2
SNORD28-201ENST00000384706 NPIPB6E9PJ23 425 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 FZD6O60353 706 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 GADD45BO75293 160 aaPredicted RBP1.31□□□□□ -2.2
SNORD28-201ENST00000384706 TSPAN15O95858 294 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 ABL1P00519 1130 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 GLI1P08151 1106 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 TMEM253P0C7T8 217 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 CTSWP56202 376 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 FKBP4Q02790 459 aaKnown RBP eCLIP1.31□□□□□ -2.2
SNORD28-201ENST00000384706 AP3B2Q13367 1082 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 TTLL10Q6ZVT0 673 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 CYFIP1Q7L576 1253 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 C1QL4Q86Z23 238 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 CILP2Q8IUL8 1156 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 GALNT12Q8IXK2 581 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 TOP6BLQ8N6T0 577 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 FLAD1Q8NFF5 587 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 KCNN1Q92952 543 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 KCNB2Q92953 911 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 PBXIP1Q96AQ6 731 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 KIRREL1Q96J84 757 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 HEXIM2Q96MH2 286 aaKnown RBP1.31□□□□□ -2.2
SNORD28-201ENST00000384706 ZNF576Q9H609 170 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 NSUN3Q9H649 340 aaKnown RBP1.31□□□□□ -2.2
SNORD28-201ENST00000384706 MKNK2Q9HBH9 465 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 PICK1Q9NRD5 415 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 CTNND2Q9UQB3 1225 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 SNX11Q9Y5W9 270 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 CSADQ9Y600 493 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 SYNGAP1Q96PV0 1343 aa1.31□□□□□ -2.2
SNORD28-201ENST00000384706 TMEM238LA0A1B0GVL6 79 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 TCAF2A6NFQ2 919 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 GNAT3A8MTJ3 354 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 FAM155AB1AL88 458 aaPredicted RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 NUAK1O60285 661 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 KRT1P04264 644 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 NEFLP07196 543 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 NEFMP07197 916 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 GSTP1P09211 210 aaKnown RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 INHBBP09529 407 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 NPR3P17342 541 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 ITPKAP23677 461 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 SSFA2P28290 1259 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 HNRNPUQ00839 825 aaKnown RBP eCLIP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 FAAP100Q0VG06 881 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 SF3B2Q13435 895 aaKnown RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 KCNA10Q16322 511 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 NKPD1Q17RQ9 610 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 KIF4BQ2VIQ3 1234 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 CDKAL1Q5VV42 579 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 KIAA0319Q5VV43 1072 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 MAP1SQ66K74 1059 aaPredicted RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 CIAPIN1Q6FI81 312 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 ATG14Q6ZNE5 492 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 AMIGO3Q86WK7 504 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 SPACA3Q8IXA5 215 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 GJD3Q8N144 294 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 FBXO15Q8NCQ5 510 aaPredicted RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 RNF214Q8ND24 703 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 TMC1Q8TDI8 760 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 ISL2Q96A47 359 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 ACSBG1Q96GR2 724 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 HSPA12BQ96MM6 686 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 CSRNP1Q96S65 589 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 TNKS2Q9H2K2 1166 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 CARS2Q9HA77 564 aaKnown RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 NPHS2Q9NP85 383 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 DCP1AQ9NPI6 582 aaPredicted RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 PRDM10Q9NQV6 1147 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 PPP4R2Q9NY27 417 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 GTF2IRD1Q9UHL9 959 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 GPN3Q9UHW5 284 aaPredicted RBP1.3□□□□□ -2.2
SNORD28-201ENST00000384706 BRPF3Q9ULD4 1205 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 MTMR7Q9Y216 660 aa1.3□□□□□ -2.2
SNORD28-201ENST00000384706 CARNS1A5YM72 827 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 H3BS24 57 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ETV2O00321 342 aaPredicted RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 IGF2BP3O00425 579 aaKnown RBP eCLIP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 CPNE3O75131 537 aaKnown RBP1.29□□□□□ -2.2
SNORD28-201ENST00000384706 BMP7P18075 431 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 HOXA5P20719 270 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 GDNFP39905 211 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 FCGRTP55899 365 aa1.29□□□□□ -2.2
SNORD28-201ENST00000384706 ERVK-24P63145 666 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms