RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 HAUS7Q99871 368 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 VPS18Q9P253 973 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 CRB1P82279 1406 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 GSDMDP57764 484 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 VWDEQ8N2E2 1590 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 H7C1W4 665 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 CNNM3Q8NE01 707 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 BCS1LQ9Y276 419 aa21.52■■□□□ 1.04
CSPG5-202ENST00000383738 KIF5BP33176 963 aa21.51■■□□□ 1.03
CSPG5-202ENST00000383738 CNNM2Q9H8M5 875 aa21.51■■□□□ 1.03
CSPG5-202ENST00000383738 LZTFL1Q9NQ48 299 aa21.51■■□□□ 1.03
CSPG5-202ENST00000383738 CEP170BQ9Y4F5 1589 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-202ENST00000383738 IDEP14735 1019 aa21.51■■□□□ 1.03
CSPG5-202ENST00000383738 AFMP43652 599 aa21.51■■□□□ 1.03
CSPG5-202ENST00000383738 GJD4Q96KN9 370 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-202ENST00000383738 ADD1P35611 737 aaKnown RBP21.51■■□□□ 1.03
CSPG5-202ENST00000383738 GTF2A1P52655 376 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-202ENST00000383738 SPATA31D1Q6ZQQ2 1576 aa21.51■■□□□ 1.03
CSPG5-202ENST00000383738 DYNLL1P63167 89 aaKnown RBP21.5■■□□□ 1.03
CSPG5-202ENST00000383738 GPCPD1Q9NPB8 672 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 CYP2D7A0A087X1C5 515 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 ZSCAN12O43309 604 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 RHOXF2BP0C7M4 288 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 EPS15P42566 896 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 EVCP57679 992 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 TBC1D9BQ66K14 1250 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 CERKQ8TCT0 537 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 RHOXF2Q9BQY4 288 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 TANGO6Q9C0B7 1094 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 GPHNQ9NQX3 736 aaPredicted RBP21.5■■□□□ 1.03
CSPG5-202ENST00000383738 ST7Q9NRC1 585 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 V9GY48 417 aaPredicted RBP21.5■■□□□ 1.03
CSPG5-202ENST00000383738 SPECC1Q5M775 1068 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 CELF1Q92879 486 aaKnown RBP21.5■■□□□ 1.03
CSPG5-202ENST00000383738 ERO1AQ96HE7 468 aa21.5■■□□□ 1.03
CSPG5-202ENST00000383738 PUS7LQ9H0K6 701 aaKnown RBP21.5■■□□□ 1.03
CSPG5-202ENST00000383738 TTF2Q9UNY4 1162 aaKnown RBP21.5■■□□□ 1.03
CSPG5-202ENST00000383738 BAG6P46379 1132 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 GABPB1Q06547 395 aaPredicted RBP21.49■■□□□ 1.03
CSPG5-202ENST00000383738 PAXIP1Q6ZW49 1069 aaPredicted RBP21.49■■□□□ 1.03
CSPG5-202ENST00000383738 ARHGEF1Q92888 912 aaKnown RBP21.49■■□□□ 1.03
CSPG5-202ENST00000383738 OSBP2Q969R2 916 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 DBNDD1Q9H9R9 158 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 CD163L1Q9NR16 1453 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 EPB41L2O43491 1005 aaKnown RBP21.49■■□□□ 1.03
CSPG5-202ENST00000383738 MMP10P09238 476 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 DIXDC1Q155Q3 683 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 UTP14CQ5TAP6 766 aaKnown RBP21.49■■□□□ 1.03
CSPG5-202ENST00000383738 LARGE1O95461 756 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 MYCNP04198 464 aaPredicted RBP21.49■■□□□ 1.03
CSPG5-202ENST00000383738 CYP21A2P08686 494 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 UBA5Q9GZZ9 404 aa21.49■■□□□ 1.03
CSPG5-202ENST00000383738 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.49■■□□□ 1.03
CSPG5-202ENST00000383738 CBFA2T2O43439 604 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
CSPG5-202ENST00000383738 POLA2Q14181 598 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 PI4K2BQ8TCG2 481 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 LEO1Q8WVC0 666 aaPredicted RBP21.48■■□□□ 1.03
CSPG5-202ENST00000383738 INCENPQ9NQS7 918 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 STAP2Q9UGK3 403 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 TPCN1Q9ULQ1 816 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 MTMR6Q9Y217 621 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 AK9Q5TCS8 1911 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 NCBP1Q09161 790 aaKnown RBP21.48■■□□□ 1.03
CSPG5-202ENST00000383738 TMEM132AQ24JP5 1023 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 C2CD5Q86YS7 1000 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 PPIP5K2O43314 1243 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 MYO1BO43795 1136 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 FILIP1LQ4L180 1135 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 PRDM4Q9UKN5 801 aa21.48■■□□□ 1.03
CSPG5-202ENST00000383738 ANGEL1Q9UNK9 670 aaKnown RBP21.47■■□□□ 1.03
CSPG5-202ENST00000383738 KCNJ14Q9UNX9 436 aa21.47■■□□□ 1.03
CSPG5-202ENST00000383738 ZNF804BA4D1E1 1349 aa21.47■■□□□ 1.03
CSPG5-202ENST00000383738 CTAGE5O15320 804 aa21.47■■□□□ 1.03
CSPG5-202ENST00000383738 FKBP15Q5T1M5 1219 aa21.47■■□□□ 1.03
CSPG5-202ENST00000383738 FAM107BQ9H098 131 aa21.47■■□□□ 1.03
CSPG5-202ENST00000383738 CLEC11AQ9Y240 323 aa21.47■■□□□ 1.03
CSPG5-202ENST00000383738 GNAT2P19087 354 aa21.46■■□□□ 1.03
CSPG5-202ENST00000383738 RDXP35241 583 aaKnown RBP21.46■■□□□ 1.03
CSPG5-202ENST00000383738 NAPAP54920 295 aa21.46■■□□□ 1.03
CSPG5-202ENST00000383738 IRX3P78415 501 aaPredicted RBP21.46■■□□□ 1.03
CSPG5-202ENST00000383738 DNAJC21Q5F1R6 531 aaKnown RBP21.46■■□□□ 1.03
CSPG5-202ENST00000383738 EYA3Q99504 573 aa21.46■■□□□ 1.03
CSPG5-202ENST00000383738 SOS2Q07890 1332 aaPredicted RBP21.46■■□□□ 1.03
CSPG5-202ENST00000383738 ZC3H13Q5T200 1668 aaKnown RBP21.46■■□□□ 1.03
CSPG5-202ENST00000383738 DCAF8L1A6NGE4 600 aa21.46■■□□□ 1.03
CSPG5-202ENST00000383738 ANKRD65E5RJM6 399 aa21.46■■□□□ 1.03
CSPG5-202ENST00000383738 TFAP4Q01664 338 aa21.46■■□□□ 1.03
CSPG5-202ENST00000383738 ZNF710Q8N1W2 664 aa21.46■■□□□ 1.03
CSPG5-202ENST00000383738 LSG1Q9H089 658 aaKnown RBP21.46■■□□□ 1.03
CSPG5-202ENST00000383738 IQGAP1P46940 1657 aa21.45■■□□□ 1.02
CSPG5-202ENST00000383738 UBA7P41226 1012 aa21.45■■□□□ 1.02
CSPG5-202ENST00000383738 MATR3P43243 847 aaKnown RBP eCLIP21.45■■□□□ 1.02
CSPG5-202ENST00000383738 RASGRF1Q13972 1273 aa21.45■■□□□ 1.02
CSPG5-202ENST00000383738 SCARF1Q14162 830 aa21.45■■□□□ 1.02
CSPG5-202ENST00000383738 IFNL3Q8IZI9 196 aa21.45■■□□□ 1.02
CSPG5-202ENST00000383738 CRACR2AQ9BSW2 395 aa21.45■■□□□ 1.02
CSPG5-202ENST00000383738 FTOQ9C0B1 505 aaKnown RBP eCLIP21.45■■□□□ 1.02
CSPG5-202ENST00000383738 SEC31AO94979 1220 aaKnown RBP21.45■■□□□ 1.02
CSPG5-202ENST00000383738 ITPK1Q13572 414 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms