RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 RBL2Q08999 1139 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 PDCLQ13371 301 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 HDAC6Q9UBN7 1215 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 MED23Q9ULK4 1368 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 ABCC6O95255 1503 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 MYH15Q9Y2K3 1946 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 ENC1O14682 589 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 FOXN1O15353 648 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 TUBBP07437 444 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 FDPSP14324 419 aaKnown RBP23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 CALRP27797 417 aaKnown RBP23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 CLNS1AP54105 237 aaKnown RBP23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 FMR1Q06787 632 aaKnown RBP eCLIP23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 SELENOOQ9BVL4 669 aa23.83■■□□□ 1.41
NKX3-2-201ENST00000382438 GOLGA6BA6NDN3 693 aa23.83■■□□□ 1.4
NKX3-2-201ENST00000382438 EIF2S2P20042 333 aaKnown RBP23.83■■□□□ 1.4
NKX3-2-201ENST00000382438 CMA1P23946 247 aa23.83■■□□□ 1.4
NKX3-2-201ENST00000382438 SEMA3FQ13275 785 aa23.83■■□□□ 1.4
NKX3-2-201ENST00000382438 SAMSN1Q9NSI8 373 aaKnown RBP23.83■■□□□ 1.4
NKX3-2-201ENST00000382438 PCDHA5Q9Y5H7 936 aa23.83■■□□□ 1.4
NKX3-2-201ENST00000382438 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.4
NKX3-2-201ENST00000382438 PDHBP11177 359 aa23.82■■□□□ 1.4
NKX3-2-201ENST00000382438 CEP85LQ5SZL2 805 aa23.82■■□□□ 1.4
NKX3-2-201ENST00000382438 DDX20Q9UHI6 824 aaKnown RBP23.82■■□□□ 1.4
NKX3-2-201ENST00000382438 SRGAP2O75044 1071 aa23.82■■□□□ 1.4
NKX3-2-201ENST00000382438 ZNF827Q17R98 1081 aa23.82■■□□□ 1.4
NKX3-2-201ENST00000382438 SYNE3Q6ZMZ3 975 aa23.82■■□□□ 1.4
NKX3-2-201ENST00000382438 CARMIL3Q8ND23 1372 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 E2F5Q15329 346 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 FMNL3Q8IVF7 1028 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 CAPZA3Q96KX2 299 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 NBPF3Q9H094 633 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 SNRKQ9NRH2 765 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 KIF3CO14782 793 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 ZEB2O60315 1214 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 TUBB2AQ13885 445 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 MYSM1Q5VVJ2 828 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 MMS19Q96T76 1030 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 TUBB2BQ9BVA1 445 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 AGLP35573 1532 aa23.81■■□□□ 1.4
NKX3-2-201ENST00000382438 RPSAP08865 295 aaKnown RBP23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 POLR3EQ9NVU0 708 aa23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 EME2A4GXA9 379 aaPredicted RBP23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 YEATS4O95619 227 aa23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 ATP1A2P50993 1020 aa23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 TEFQ10587 303 aa23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 WLSQ5T9L3 541 aa23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 METTL16Q86W50 562 aaKnown RBP23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 ANKRD18AQ8IVF6 992 aa23.8■■□□□ 1.4
NKX3-2-201ENST00000382438 CRYMQ14894 314 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 HDGFL1Q5TGJ6 251 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 RBM28Q9NW13 759 aaKnown RBP23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 CHD1O14646 1710 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 KIF28PB7ZC32 967 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 ANXA1P04083 346 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 CCDC40Q4G0X9 1142 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 USPL1Q5W0Q7 1092 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 B4GALNT4Q76KP1 1039 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 RASGRP2Q7LDG7 609 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 PI4KAP2A4QPH2 592 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 NAA25Q14CX7 972 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 ANO1Q5XXA6 986 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 RAB11FIP4Q86YS3 637 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 PI4KAP1Q8N8J0 262 aa23.79■■□□□ 1.4
NKX3-2-201ENST00000382438 SALL1Q9NSC2 1324 aa23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 AMPD2Q01433 879 aa23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 PPFIBP1Q86W92 1011 aa23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 TRIM10Q9UDY6 481 aa23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 HOOK1Q9UJC3 728 aaKnown RBP23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 A0A0G2JLW4 131 aa23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 SCLT1Q96NL6 688 aa23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 PANX2Q96RD6 677 aa23.78■■□□□ 1.4
NKX3-2-201ENST00000382438 RTN2O75298 545 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 SASH1O94885 1247 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 ERCC3P19447 782 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 IRX1P78414 480 aaPredicted RBP23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 FKBP15Q5T1M5 1219 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 SHC4Q6S5L8 630 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 C8orf76Q96K31 380 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 PDIA3P30101 505 aaKnown RBP23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 DHX32Q7L7V1 743 aaKnown RBP23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 RRP36Q96EU6 259 aaKnown RBP23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 SH3GL2Q99962 352 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 SLC40A1Q9NP59 571 aa23.77■■□□□ 1.4
NKX3-2-201ENST00000382438 NEXMIFQ5QGS0 1516 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 PPP1R12BO60237 982 aaPredicted RBP23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 MRPL12P52815 198 aaKnown RBP23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 NR1I3Q14994 352 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 ARL8AQ96BM9 186 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 ZNF18P17022 549 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 CASP14P31944 242 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 PPARDQ03181 441 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 SF3B2Q13435 895 aaKnown RBP23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 SPECC1Q5M775 1068 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 CCDC13Q8IYE1 715 aa23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 GPHNQ9NQX3 736 aaPredicted RBP23.76■■□□□ 1.39
NKX3-2-201ENST00000382438 BEND3Q5T5X7 828 aa23.75■■□□□ 1.39
NKX3-2-201ENST00000382438 KCTD16Q68DU8 428 aa23.75■■□□□ 1.39
NKX3-2-201ENST00000382438 SH2D3CQ8N5H7 860 aa23.75■■□□□ 1.39
NKX3-2-201ENST00000382438 GUCA1BQ9UMX6 200 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms