RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 MCM9Q9NXL9 1143 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 CHMP5Q9NZZ3 219 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 CD2APQ9Y5K6 639 aa9.46□□□□□ -0.9
ERCC8-202ENST00000381118 ECM29Q5VYK3 1845 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 GPR75-ASB3A0A0A6YYF3 556 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 KDM4AO75164 1064 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 PRDM1O75626 825 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 CYP2D6P10635 497 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 DDIT3P35638 169 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 ANTXR2P58335 489 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 DACT2Q5SW24 774 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 TMED8Q6PL24 325 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-202ENST00000381118 CYB5R4Q7L1T6 521 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 TEX11Q8IYF3 940 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 ZSCAN31Q96LW9 406 aaPredicted RBP9.45□□□□□ -0.9
ERCC8-202ENST00000381118 ATP8A2Q9NTI2 1148 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 DAGLAQ9Y4D2 1042 aa9.45□□□□□ -0.9
ERCC8-202ENST00000381118 RAD17O75943 681 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 RBM5P52756 815 aaKnown RBP eCLIP9.44□□□□□ -0.9
ERCC8-202ENST00000381118 ST3GAL1Q11201 340 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 PICALMQ13492 652 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 PKP1Q13835 747 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 STAG1Q8WVM7 1258 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 ZKSCAN3Q9BRR0 538 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 ALDH8A1Q9H2A2 487 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-202ENST00000381118 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-202ENST00000381118 SAP30BPQ9UHR5 308 aaKnown RBP9.44□□□□□ -0.9
ERCC8-202ENST00000381118 PCDHAC2Q9Y5I4 1007 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 GAKO14976 1311 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 IGSF3O75054 1194 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 PPP4CP60510 307 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 RAB11FIP4Q86YS3 637 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 TAOK3Q9H2K8 898 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 ZSWIM5Q9P217 1185 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 ARPP21Q9UBL0 812 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-202ENST00000381118 SUGT1Q9Y2Z0 365 aa9.44□□□□□ -0.9
ERCC8-202ENST00000381118 IARSP41252 1262 aaKnown RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 CRKP46108 304 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 RHBDL3P58872 404 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 CCT2P78371 535 aaKnown RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 GIMAP6Q6P9H5 292 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 INTS4Q96HW7 963 aaKnown RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 KRT23Q9C075 422 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 CNNM2Q9H8M5 875 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 CWC22Q9HCG8 908 aaKnown RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 ARFGEF1Q9Y6D6 1849 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 FLT1P17948 1338 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 MYH8P13535 1937 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 PSMD14O00487 310 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 RANBP6O60518 1105 aaKnown RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 RASSF7Q02833 373 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 SCRN1Q12765 414 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 NIM1KQ8IY84 436 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 AGXT2Q9BYV1 514 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 SMC3Q9UQE7 1217 aa9.43□□□□□ -0.9
ERCC8-202ENST00000381118 ZBTB12Q9Y330 459 aaPredicted RBP9.43□□□□□ -0.9
ERCC8-202ENST00000381118 NFKBIEO00221 500 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 POLR3DP05423 398 aaPredicted RBP9.42□□□□□ -0.9
ERCC8-202ENST00000381118 PLCG2P16885 1265 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 GJB2P29033 226 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 PLCD1P51178 756 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 AMOTL1Q8IY63 956 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 GTF3C6Q969F1 213 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 DYNLL2Q96FJ2 89 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 USP40Q9NVE5 1235 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
ERCC8-202ENST00000381118 ANAPC4Q9UJX5 808 aa9.42□□□□□ -0.9
ERCC8-202ENST00000381118 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
ERCC8-202ENST00000381118 KLF18A0A0U1RQI7 1052 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 IFIT3O14879 490 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 RXRAP19793 462 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 CACNB3P54284 484 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 TMEM67Q5HYA8 995 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 HHIPL2Q6UWX4 724 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 NFXL1Q6ZNB6 911 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 CERS3Q8IU89 383 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 ESR2Q92731 530 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 NCOA5Q9HCD5 579 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 BRPF3Q9ULD4 1205 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 CIZ1Q9ULV3 898 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 ANGEL1Q9UNK9 670 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 SH2B2O14492 632 aaPredicted RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 SLC3A2P08195 630 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 PDIA3P30101 505 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 FKBP1AP62942 108 aaKnown RBP9.41□□□□□ -0.9
ERCC8-202ENST00000381118 RAB3GAP1Q15042 981 aa9.41□□□□□ -0.9
ERCC8-202ENST00000381118 NFKBIBQ15653 356 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms