RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ZFPM1Q8IX07 1006 aa21.82■■□□□ 1.08
HMGN1-203ENST00000380748 KLHDC4Q8TBB5 520 aa21.82■■□□□ 1.08
HMGN1-203ENST00000380748 SPINK5Q9NQ38 1064 aaPredicted RBP21.82■■□□□ 1.08
HMGN1-203ENST00000380748 STXBP5LQ9Y2K9 1186 aa21.82■■□□□ 1.08
HMGN1-203ENST00000380748 ATRNL1Q5VV63 1379 aa21.82■■□□□ 1.08
HMGN1-203ENST00000380748 PTPRFP10586 1907 aa21.81■■□□□ 1.08
HMGN1-203ENST00000380748 PHF20L1A8MW92 1017 aa21.81■■□□□ 1.08
HMGN1-203ENST00000380748 PTPRAP18433 802 aa21.81■■□□□ 1.08
HMGN1-203ENST00000380748 RABL6Q3YEC7 729 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-203ENST00000380748 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
HMGN1-203ENST00000380748 SCYL3Q8IZE3 742 aa21.81■■□□□ 1.08
HMGN1-203ENST00000380748 ANKRD44Q8N8A2 993 aa21.81■■□□□ 1.08
HMGN1-203ENST00000380748 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.81■■□□□ 1.084e-10■■■■□ 24
HMGN1-203ENST00000380748 DOCK2Q92608 1830 aa21.8■■□□□ 1.08
HMGN1-203ENST00000380748 FGFR2P21802 821 aa21.8■■□□□ 1.08
HMGN1-203ENST00000380748 SMCR8Q8TEV9 937 aaPredicted RBP21.8■■□□□ 1.08
HMGN1-203ENST00000380748 PICK1Q9NRD5 415 aa21.8■■□□□ 1.08
HMGN1-203ENST00000380748 SLC45A1Q9Y2W3 748 aa21.8■■□□□ 1.08
HMGN1-203ENST00000380748 AFG3L2Q9Y4W6 797 aa21.8■■□□□ 1.08
HMGN1-203ENST00000380748 KIF16BQ96L93 1317 aa21.8■■□□□ 1.08
HMGN1-203ENST00000380748 IFIT1P09914 478 aaKnown RBP21.79■■□□□ 1.08
HMGN1-203ENST00000380748 SYN1P17600 705 aa21.79■■□□□ 1.08
HMGN1-203ENST00000380748 PRDX5P30044 214 aa21.79■■□□□ 1.08
HMGN1-203ENST00000380748 PUM3Q15397 648 aaKnown RBP21.79■■□□□ 1.08
HMGN1-203ENST00000380748 ANKRD13CQ8N6S4 541 aa21.79■■□□□ 1.08
HMGN1-203ENST00000380748 WDR66Q8TBY9 1149 aa21.79■■□□□ 1.08
HMGN1-203ENST00000380748 USP40Q9NVE5 1235 aa21.79■■□□□ 1.08
HMGN1-203ENST00000380748 MTMR10Q9NXD2 777 aa21.79■■□□□ 1.08
HMGN1-203ENST00000380748 UTYO14607 1347 aa21.79■■□□□ 1.08
HMGN1-203ENST00000380748 LRIT3Q3SXY7 679 aa21.78■■□□□ 1.08
HMGN1-203ENST00000380748 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-203ENST00000380748 PHIPQ8WWQ0 1821 aa21.78■■□□□ 1.08
HMGN1-203ENST00000380748 SLURP2P0DP57 97 aa21.77■■□□□ 1.08
HMGN1-203ENST00000380748 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-203ENST00000380748 MAGEA10P43363 369 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-203ENST00000380748 COA7Q96BR5 231 aa21.77■■□□□ 1.08
HMGN1-203ENST00000380748 COL25A1Q9BXS0 654 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-203ENST00000380748 TRIM75PA6NK02 468 aa21.76■■□□□ 1.07
HMGN1-203ENST00000380748 DOCK1Q14185 1865 aa21.76■■□□□ 1.07
HMGN1-203ENST00000380748 DDX60LQ5H9U9 1706 aaKnown RBP21.76■■□□□ 1.07
HMGN1-203ENST00000380748 CCDC84Q86UT8 332 aaPredicted RBP21.76■■□□□ 1.07
HMGN1-203ENST00000380748 TDHQ8IZJ6 230 aa21.76■■□□□ 1.07
HMGN1-203ENST00000380748 ANKLE1Q8NAG6 615 aa21.76■■□□□ 1.07
HMGN1-203ENST00000380748 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
HMGN1-203ENST00000380748 LAMA2P24043 3122 aaKnown RBP21.76■■□□□ 1.07
HMGN1-203ENST00000380748 RGS3P49796 1198 aa21.75■■□□□ 1.07
HMGN1-203ENST00000380748 TRIM32Q13049 653 aa21.75■■□□□ 1.07
HMGN1-203ENST00000380748 SH3BP5LQ7L8J4 393 aa21.75■■□□□ 1.07
HMGN1-203ENST00000380748 NBPF3Q9H094 633 aa21.75■■□□□ 1.07
HMGN1-203ENST00000380748 AGTPBP1Q9UPW5 1226 aa21.75■■□□□ 1.07
HMGN1-203ENST00000380748 VCANP13611 3396 aa21.74■■□□□ 1.07
HMGN1-203ENST00000380748 HMGCRP04035 888 aa21.74■■□□□ 1.07
HMGN1-203ENST00000380748 SLC5A1P13866 664 aa21.74■■□□□ 1.07
HMGN1-203ENST00000380748 NCBP3Q53F19 620 aaKnown RBP21.74■■□□□ 1.07
HMGN1-203ENST00000380748 TREML2Q5T2D2 321 aa21.74■■□□□ 1.07
HMGN1-203ENST00000380748 LDHBP07195 334 aaKnown RBP21.73■■□□□ 1.07
HMGN1-203ENST00000380748 FAM110CQ1W6H9 321 aa21.73■■□□□ 1.07
HMGN1-203ENST00000380748 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
HMGN1-203ENST00000380748 C11orf49Q9H6J7 331 aa21.73■■□□□ 1.07
HMGN1-203ENST00000380748 LRRFIP2Q9Y608 721 aaKnown RBP21.73■■□□□ 1.07
HMGN1-203ENST00000380748 RFX7Q2KHR2 1363 aa21.73■■□□□ 1.07
HMGN1-203ENST00000380748 ZSCAN29Q8IWY8 852 aaPredicted RBP21.72■■□□□ 1.07
HMGN1-203ENST00000380748 LPIN2Q92539 896 aa21.72■■□□□ 1.07
HMGN1-203ENST00000380748 IDI2Q9BXS1 227 aa21.72■■□□□ 1.07
HMGN1-203ENST00000380748 UBE2OQ9C0C9 1292 aaKnown RBP21.72■■□□□ 1.07
HMGN1-203ENST00000380748 DDTLA6NHG4 134 aaPredicted RBP21.71■■□□□ 1.07
HMGN1-203ENST00000380748 ENTPD3O75355 529 aa21.71■■□□□ 1.07
HMGN1-203ENST00000380748 MAP3K10Q02779 954 aa21.71■■□□□ 1.07
HMGN1-203ENST00000380748 HMX1Q9NP08 348 aaPredicted RBP21.71■■□□□ 1.07
HMGN1-203ENST00000380748 RPTORQ8N122 1335 aa21.71■■□□□ 1.07
HMGN1-203ENST00000380748 CTNND1O60716 968 aaKnown RBP21.7■■□□□ 1.06
HMGN1-203ENST00000380748 GJD2Q9UKL4 321 aa21.7■■□□□ 1.06
HMGN1-203ENST00000380748 PNMA3Q9UL41 463 aa21.7■■□□□ 1.06
HMGN1-203ENST00000380748 PFASO15067 1338 aa21.7■■□□□ 1.06
HMGN1-203ENST00000380748 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.06
HMGN1-203ENST00000380748 EYA2O00167 538 aa21.69■■□□□ 1.06
HMGN1-203ENST00000380748 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.69■■□□□ 1.06
HMGN1-203ENST00000380748 DDX4Q9NQI0 724 aaKnown RBP21.69■■□□□ 1.06
HMGN1-203ENST00000380748 EYSQ5T1H1 3165 aa21.69■■□□□ 1.06
HMGN1-203ENST00000380748 RFX5P48382 616 aaPredicted RBP21.68■■□□□ 1.06
HMGN1-203ENST00000380748 TRIB2Q92519 343 aa21.68■■□□□ 1.06
HMGN1-203ENST00000380748 OGDHLQ9ULD0 1010 aa21.68■■□□□ 1.06
HMGN1-203ENST00000380748 SALL1Q9NSC2 1324 aa21.68■■□□□ 1.06
HMGN1-203ENST00000380748 LOC285556D6RIA3 1793 aa21.68■■□□□ 1.06
HMGN1-203ENST00000380748 PLXNB2O15031 1838 aa21.68■■□□□ 1.06
HMGN1-203ENST00000380748 GAKO14976 1311 aa21.67■■□□□ 1.06
HMGN1-203ENST00000380748 PICALMQ13492 652 aa21.67■■□□□ 1.06
HMGN1-203ENST00000380748 ATG9AQ7Z3C6 839 aa21.67■■□□□ 1.06
HMGN1-203ENST00000380748 SPTBN5Q9NRC6 3674 aaKnown RBP21.67■■□□□ 1.06
HMGN1-203ENST00000380748 DNAH12Q6ZR08 3092 aa21.66■■□□□ 1.06
HMGN1-203ENST00000380748 PROCA1Q8NCQ7 364 aaPredicted RBP21.66■■□□□ 1.06
HMGN1-203ENST00000380748 FAM196BA6NMK8 535 aa21.65■■□□□ 1.06
HMGN1-203ENST00000380748 PHKA1P46020 1223 aa21.65■■□□□ 1.06
HMGN1-203ENST00000380748 GCLCP48506 637 aaPredicted RBP21.65■■□□□ 1.06
HMGN1-203ENST00000380748 GUCD1Q96NT3 240 aa21.65■■□□□ 1.06
HMGN1-203ENST00000380748 GNL3LQ9NVN8 582 aaKnown RBP21.65■■□□□ 1.06
HMGN1-203ENST00000380748 SPP2Q13103 211 aa21.64■■□□□ 1.05
HMGN1-203ENST00000380748 ATP2B3Q16720 1220 aa21.64■■□□□ 1.05
HMGN1-203ENST00000380748 MAP3K21Q5TCX8 1036 aa21.64■■□□□ 1.05
HMGN1-203ENST00000380748 USP44Q9H0E7 712 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms