RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 MKRN1Q9UHC7 482 aaKnown RBP22.53■■□□□ 1.2
SMN2-202ENST00000380742 FLT1P17948 1338 aa22.53■■□□□ 1.2
SMN2-202ENST00000380742 PATL2C9JE40 543 aaKnown RBP22.52■■□□□ 1.2
SMN2-202ENST00000380742 ENTPD3O75355 529 aa22.52■■□□□ 1.2
SMN2-202ENST00000380742 NPM3O75607 178 aaKnown RBP22.52■■□□□ 1.2
SMN2-202ENST00000380742 MFAP1P55081 439 aaKnown RBP22.52■■□□□ 1.2
SMN2-202ENST00000380742 MAP1SQ66K74 1059 aaPredicted RBP22.52■■□□□ 1.2
SMN2-202ENST00000380742 FAM83AQ86UY5 434 aa22.52■■□□□ 1.2
SMN2-202ENST00000380742 DCP1AQ9NPI6 582 aaPredicted RBP22.52■■□□□ 1.2
SMN2-202ENST00000380742 SIPA1L1O43166 1804 aa22.52■■□□□ 1.2
SMN2-202ENST00000380742 HSPD1P10809 573 aaKnown RBP22.51■■□□□ 1.19
SMN2-202ENST00000380742 TNFAIP1Q13829 316 aa22.51■■□□□ 1.19
SMN2-202ENST00000380742 RASA3Q14644 834 aa22.51■■□□□ 1.19
SMN2-202ENST00000380742 FAM151AQ8WW52 585 aa22.51■■□□□ 1.19
SMN2-202ENST00000380742 OSBPL5Q9H0X9 879 aaPredicted RBP22.51■■□□□ 1.19
SMN2-202ENST00000380742 DEFB129Q9H1M3 183 aa22.51■■□□□ 1.19
SMN2-202ENST00000380742 EPB41L4AQ9HCS5 686 aaPredicted RBP22.51■■□□□ 1.19
SMN2-202ENST00000380742 ATP8A2Q9NTI2 1148 aa22.51■■□□□ 1.19
SMN2-202ENST00000380742 LAMB1P07942 1786 aa22.51■■□□□ 1.19
SMN2-202ENST00000380742 ADM5C9JUS6 153 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 TNNI2P48788 182 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 DLK2Q6UY11 383 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 KRT26Q7Z3Y9 468 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 GLIS2Q9BZE0 524 aaPredicted RBP22.5■■□□□ 1.19
SMN2-202ENST00000380742 TMEM39BQ9GZU3 492 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 APPP05067 770 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 SH3BP5LQ7L8J4 393 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 USP48Q86UV5 1035 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 SULF1Q8IWU6 871 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 CDAN1Q8IWY9 1227 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 IFNL3Q8IZI9 196 aa22.5■■□□□ 1.19
SMN2-202ENST00000380742 SAP30BPQ9UHR5 308 aaKnown RBP22.5■■□□□ 1.19
SMN2-202ENST00000380742 RPAP1Q9BWH6 1393 aaPredicted RBP22.49■■□□□ 1.19
SMN2-202ENST00000380742 PTH1RQ03431 593 aa22.49■■□□□ 1.19
SMN2-202ENST00000380742 C8orf34Q49A92 452 aa22.49■■□□□ 1.19
SMN2-202ENST00000380742 CHADLQ6NUI6 762 aa22.49■■□□□ 1.19
SMN2-202ENST00000380742 GIMAP6Q6P9H5 292 aa22.49■■□□□ 1.19
SMN2-202ENST00000380742 CDC37L1Q7L3B6 337 aa22.49■■□□□ 1.19
SMN2-202ENST00000380742 TEPSINQ96N21 525 aa22.49■■□□□ 1.19
SMN2-202ENST00000380742 COL2A1P02458 1487 aaPredicted RBP22.48■■□□□ 1.19
SMN2-202ENST00000380742 LAMA4Q16363 1823 aa22.48■■□□□ 1.19
SMN2-202ENST00000380742 DDTLA6NHG4 134 aaPredicted RBP22.48■■□□□ 1.19
SMN2-202ENST00000380742 PRAMEF18Q5VWM3 479 aa22.48■■□□□ 1.19
SMN2-202ENST00000380742 PALD1Q9ULE6 856 aa22.48■■□□□ 1.19
SMN2-202ENST00000380742 ALX1Q15699 326 aa22.47■■□□□ 1.19
SMN2-202ENST00000380742 SLC4A8Q2Y0W8 1093 aa22.47■■□□□ 1.19
SMN2-202ENST00000380742 DSCC1Q9BVC3 393 aa22.47■■□□□ 1.19
SMN2-202ENST00000380742 LSG1Q9H089 658 aaKnown RBP22.47■■□□□ 1.19
SMN2-202ENST00000380742 MCM9Q9NXL9 1143 aa22.47■■□□□ 1.19
SMN2-202ENST00000380742 PPP2R3BQ9Y5P8 575 aa22.47■■□□□ 1.19
SMN2-202ENST00000380742 ATRNL1Q5VV63 1379 aa22.47■■□□□ 1.19
SMN2-202ENST00000380742 TRPM7Q96QT4 1865 aa22.47■■□□□ 1.19
SMN2-202ENST00000380742 USP17L12C9JPN9 530 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 USP17L21D6R901 530 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 FGAP02671 866 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 TDO2P48775 406 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 EVX2Q03828 476 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 CTR9Q6PD62 1173 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 ZSCAN29Q8IWY8 852 aaPredicted RBP22.46■■□□□ 1.19
SMN2-202ENST00000380742 DDRGK1Q96HY6 314 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 NACAP1Q9BZK3 213 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 NAPBQ9H115 298 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 ANO2Q9NQ90 1003 aa22.46■■□□□ 1.19
SMN2-202ENST00000380742 CYP2D7A0A087X1C5 515 aa22.45■■□□□ 1.18
SMN2-202ENST00000380742 TOMM70O94826 608 aa22.45■■□□□ 1.18
SMN2-202ENST00000380742 ITGBL1O95965 494 aaPredicted RBP22.45■■□□□ 1.18
SMN2-202ENST00000380742 CYP2D6P10635 497 aa22.45■■□□□ 1.18
SMN2-202ENST00000380742 NBPF12Q5TAG4 269 aaPredicted RBP22.45■■□□□ 1.18
SMN2-202ENST00000380742 KIAA1211Q6ZU35 1233 aa22.45■■□□□ 1.18
SMN2-202ENST00000380742 MYH8P13535 1937 aa22.45■■□□□ 1.18
SMN2-202ENST00000380742 SMIM22K7EJ46 135 aa22.44■■□□□ 1.18
SMN2-202ENST00000380742 TRAF5O00463 557 aa22.44■■□□□ 1.18
SMN2-202ENST00000380742 PLCD1P51178 756 aa22.44■■□□□ 1.18
SMN2-202ENST00000380742 FMR1Q06787 632 aaKnown RBP eCLIP22.44■■□□□ 1.18
SMN2-202ENST00000380742 SBK1Q52WX2 424 aa22.44■■□□□ 1.18
SMN2-202ENST00000380742 MAP4K1Q92918 833 aa22.44■■□□□ 1.18
SMN2-202ENST00000380742 CDCA5Q96FF9 252 aa22.44■■□□□ 1.18
SMN2-202ENST00000380742 DHX36Q9H2U1 1008 aaKnown RBP22.44■■□□□ 1.18
SMN2-202ENST00000380742 ZMYM6O95789 1325 aa22.43■■□□□ 1.18
SMN2-202ENST00000380742 POLR3DP05423 398 aaPredicted RBP22.43■■□□□ 1.18
SMN2-202ENST00000380742 SLURP2P0DP57 97 aa22.43■■□□□ 1.18
SMN2-202ENST00000380742 C12orf60Q5U649 245 aa22.43■■□□□ 1.18
SMN2-202ENST00000380742 RBM46Q8TBY0 533 aaKnown RBP22.43■■□□□ 1.18
SMN2-202ENST00000380742 CSRNP1Q96S65 589 aa22.43■■□□□ 1.18
SMN2-202ENST00000380742 ARPP21Q9UBL0 812 aaPredicted RBP22.43■■□□□ 1.18
SMN2-202ENST00000380742 SSC5DA1L4H1 1573 aa22.43■■□□□ 1.18
SMN2-202ENST00000380742 SEC24BO95487 1268 aa22.42■■□□□ 1.18
SMN2-202ENST00000380742 MINDY4BA8MYZ0 360 aa22.41■■□□□ 1.18
SMN2-202ENST00000380742 TTC6Q86TZ1 520 aa22.41■■□□□ 1.18
SMN2-202ENST00000380742 SMC1BQ8NDV3 1235 aa22.41■■□□□ 1.18
SMN2-202ENST00000380742 PI4KBQ9UBF8 816 aa22.41■■□□□ 1.18
SMN2-202ENST00000380742 REC8O95072 547 aa22.4■■□□□ 1.18
SMN2-202ENST00000380742 HLA-DOAP06340 250 aa22.4■■□□□ 1.18
SMN2-202ENST00000380742 RBM8AQ9Y5S9 174 aaKnown RBP22.4■■□□□ 1.18
SMN2-202ENST00000380742 U3KPZ7 1027 aaPredicted RBP22.4■■□□□ 1.18
SMN2-202ENST00000380742 PPARAQ07869 468 aa22.39■■□□□ 1.18
SMN2-202ENST00000380742 SUPT20HL1Q3ZLR7 823 aa22.39■■□□□ 1.18
SMN2-202ENST00000380742 MIGA2Q7L4E1 593 aa22.39■■□□□ 1.18
SMN2-202ENST00000380742 METTL16Q86W50 562 aaKnown RBP22.39■■□□□ 1.18
SMN2-202ENST00000380742 AMOTL1Q8IY63 956 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms