RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SDR42E1Q8WUS8 393 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 CRNKL1Q9BZJ0 848 aaKnown RBP15.22■□□□□ 0.03
SMN1-202ENST00000380707 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
SMN1-202ENST00000380707 TNFAIP1Q13829 316 aa15.21■□□□□ 0.03
SMN1-202ENST00000380707 PRAMEF18Q5VWM3 479 aa15.21■□□□□ 0.03
SMN1-202ENST00000380707 CDC37L1Q7L3B6 337 aa15.21■□□□□ 0.03
SMN1-202ENST00000380707 FAM83AQ86UY5 434 aa15.21■□□□□ 0.03
SMN1-202ENST00000380707 SLC4A4Q9Y6R1 1079 aa15.21■□□□□ 0.03
SMN1-202ENST00000380707 FLT1P17948 1338 aa15.21■□□□□ 0.02
SMN1-202ENST00000380707 ENTPD3O75355 529 aa15.2■□□□□ 0.02
SMN1-202ENST00000380707 CDC45O75419 566 aa15.2■□□□□ 0.02
SMN1-202ENST00000380707 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
SMN1-202ENST00000380707 USP5P45974 858 aa15.2■□□□□ 0.02
SMN1-202ENST00000380707 TNNI2P48788 182 aa15.2■□□□□ 0.02
SMN1-202ENST00000380707 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
SMN1-202ENST00000380707 RBM46Q8TBY0 533 aaKnown RBP15.2■□□□□ 0.02
SMN1-202ENST00000380707 FAM151AQ8WW52 585 aa15.2■□□□□ 0.02
SMN1-202ENST00000380707 MKRN1Q9UHC7 482 aaKnown RBP15.2■□□□□ 0.02
SMN1-202ENST00000380707 CDK5RAP2Q96SN8 1893 aa15.2■□□□□ 0.02
SMN1-202ENST00000380707 GSG1L2A8MUP6 293 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 TRAF5O00463 557 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 FOXP2O15409 715 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMN1-202ENST00000380707 VPS53Q5VIR6 699 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 SMC1BQ8NDV3 1235 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 TEPSINQ96N21 525 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 OSBPL5Q9H0X9 879 aaPredicted RBP15.19■□□□□ 0.02
SMN1-202ENST00000380707 DCP1AQ9NPI6 582 aaPredicted RBP15.19■□□□□ 0.02
SMN1-202ENST00000380707 CCDC171Q6TFL3 1326 aa15.19■□□□□ 0.02
SMN1-202ENST00000380707 SGSM2O43147 1006 aa15.18■□□□□ 0.02
SMN1-202ENST00000380707 GNAT2P19087 354 aa15.18■□□□□ 0.02
SMN1-202ENST00000380707 RUFY2Q8WXA3 655 aa15.18■□□□□ 0.02
SMN1-202ENST00000380707 ATP8A2Q9NTI2 1148 aa15.18■□□□□ 0.02
SMN1-202ENST00000380707 SAP30BPQ9UHR5 308 aaKnown RBP15.18■□□□□ 0.02
SMN1-202ENST00000380707 FOCADQ5VW36 1801 aa15.18■□□□□ 0.02
SMN1-202ENST00000380707 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
SMN1-202ENST00000380707 PATL2C9JE40 543 aaKnown RBP15.17■□□□□ 0.02
SMN1-202ENST00000380707 APPP05067 770 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
SMN1-202ENST00000380707 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 EPB41L4AQ9HCS5 686 aaPredicted RBP15.17■□□□□ 0.02
SMN1-202ENST00000380707 PALD1Q9ULE6 856 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 PPP2R3BQ9Y5P8 575 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 HSPD1P10809 573 aaKnown RBP15.17■□□□□ 0.02
SMN1-202ENST00000380707 MFAP1P55081 439 aaKnown RBP15.17■□□□□ 0.02
SMN1-202ENST00000380707 SLC4A8Q2Y0W8 1093 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 CDCA5Q96FF9 252 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 MCM9Q9NXL9 1143 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 RAD50Q92878 1312 aa15.17■□□□□ 0.02
SMN1-202ENST00000380707 EVX2Q03828 476 aa15.16■□□□□ 0.02
SMN1-202ENST00000380707 GIMAP6Q6P9H5 292 aa15.16■□□□□ 0.02
SMN1-202ENST00000380707 CASC1Q6TDU7 716 aa15.16■□□□□ 0.02
SMN1-202ENST00000380707 ZSCAN29Q8IWY8 852 aaPredicted RBP15.16■□□□□ 0.02
SMN1-202ENST00000380707 IFNL3Q8IZI9 196 aa15.16■□□□□ 0.02
SMN1-202ENST00000380707 CSRNP1Q96S65 589 aa15.16■□□□□ 0.02
SMN1-202ENST00000380707 ATRNL1Q5VV63 1379 aa15.16■□□□□ 0.02
SMN1-202ENST00000380707 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
SMN1-202ENST00000380707 FSTL1Q12841 308 aa15.15■□□□□ 0.02
SMN1-202ENST00000380707 CTR9Q6PD62 1173 aa15.15■□□□□ 0.02
SMN1-202ENST00000380707 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
SMN1-202ENST00000380707 PASKQ96RG2 1323 aa15.15■□□□□ 0.02
SMN1-202ENST00000380707 RPAP1Q9BWH6 1393 aaPredicted RBP15.15■□□□□ 0.02
SMN1-202ENST00000380707 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
SMN1-202ENST00000380707 CYP2D7A0A087X1C5 515 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 USP17L21D6R901 530 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 SMIM22K7EJ46 135 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 FGAP02671 866 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 CYP2D6P10635 497 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 PLCD1P51178 756 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 PTH1RQ03431 593 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 DDRGK1Q96HY6 314 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 NACAP1Q9BZK3 213 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 DHX36Q9H2U1 1008 aaKnown RBP15.14■□□□□ 0.01
SMN1-202ENST00000380707 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
SMN1-202ENST00000380707 SSC5DA1L4H1 1573 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 PCNTO95613 3336 aa15.14■□□□□ 0.01
SMN1-202ENST00000380707 BAZ2AQ9UIF9 1905 aaKnown RBP15.13■□□□□ 0.01
SMN1-202ENST00000380707 NAV1Q8NEY1 1877 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 DDX60LQ5H9U9 1706 aaKnown RBP15.13■□□□□ 0.01
SMN1-202ENST00000380707 POLR3DP05423 398 aaPredicted RBP15.13■□□□□ 0.01
SMN1-202ENST00000380707 TDO2P48775 406 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 ALX1Q15699 326 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 SUPT20HL1Q3ZLR7 823 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 CST9Q5W186 159 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 NAPBQ9H115 298 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 ZNF408Q9H9D4 720 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 FZD1Q9UP38 647 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 MYH1P12882 1939 aa15.13■□□□□ 0.01
SMN1-202ENST00000380707 CELF2O95319 508 aaKnown RBP15.12■□□□□ 0.01
SMN1-202ENST00000380707 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
SMN1-202ENST00000380707 DSCC1Q9BVC3 393 aa15.12■□□□□ 0.01
SMN1-202ENST00000380707 PI4KBQ9UBF8 816 aa15.12■□□□□ 0.01
SMN1-202ENST00000380707 HLA-DOAP06340 250 aa15.12■□□□□ 0.01
SMN1-202ENST00000380707 PRKG1Q13976 671 aa15.12■□□□□ 0.01
SMN1-202ENST00000380707 SBK1Q52WX2 424 aa15.12■□□□□ 0.01
SMN1-202ENST00000380707 TTC6Q86TZ1 520 aa15.12■□□□□ 0.01
SMN1-202ENST00000380707 LSG1Q9H089 658 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms