RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 TUBB4BP68371 445 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 G3BP1Q13283 466 aaKnown RBP eCLIP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 DRP2Q13474 957 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 NCAPHQ15003 741 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 IFFO2Q5TF58 517 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 HDGFL1Q5TGJ6 251 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 BZW1Q7L1Q6 419 aaKnown RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 RPUSD2Q8IZ73 545 aaKnown RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 KCNN1Q92952 543 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 NUDT16Q96DE0 195 aaKnown RBP7.47□□□□□ -1.21
RIPK1-202ENST00000380409 SAAL1Q96ER3 474 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 EPAS1Q99814 870 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 LZTS2Q9BRK4 669 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 SLC40A1Q9NP59 571 aa7.47□□□□□ -1.21
RIPK1-202ENST00000380409 GOLGB1Q14789 3259 aaKnown RBP7.46□□□□□ -1.21
RIPK1-202ENST00000380409 MYH7P12883 1935 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 MED1Q15648 1581 aaPredicted RBP7.46□□□□□ -1.21
RIPK1-202ENST00000380409 OVOS2A0A0G2JMS6 1433 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 OVOS2A0A0J9YW53 1432 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 BCL9O00512 1426 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 OVOS2Q6IE36 1432 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 LINGO3P0C6S8 592 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 KIF4BQ2VIQ3 1234 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.46□□□□□ -1.21
RIPK1-202ENST00000380409 CCDC13Q8IYE1 715 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 LEO1Q8WVC0 666 aaPredicted RBP7.46□□□□□ -1.21
RIPK1-202ENST00000380409 NGLY1Q96IV0 654 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 ZNF396Q96N95 335 aaPredicted RBP7.46□□□□□ -1.21
RIPK1-202ENST00000380409 AGAP3Q96P47 875 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 EHD4Q9H223 541 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 HYPKQ9NX55 129 aa7.46□□□□□ -1.21
RIPK1-202ENST00000380409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.46□□□□□ -1.21
RIPK1-202ENST00000380409 LRRC10BA6NIK2 292 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 PDHBP11177 359 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 ATP2B2Q01814 1243 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 CEBPZQ03701 1054 aaKnown RBP7.46□□□□□ -1.22
RIPK1-202ENST00000380409 CEP85Q6P2H3 762 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 ACBD3Q9H3P7 528 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 C19orf44Q9H6X5 657 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 DTNBO60941 627 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 ANXA1P04083 346 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 GJB2P29033 226 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 PDE1AP54750 535 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 CHMP4BP1P59074 171 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 KRT85P78386 507 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 ME3Q16798 604 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 CEP85LQ5SZL2 805 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 HHATQ5VTY9 493 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 RIC3Q7Z5B4 369 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 SDCCAG8Q86SQ7 713 aaPredicted RBP7.46□□□□□ -1.22
RIPK1-202ENST00000380409 ENGASEQ8NFI3 743 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 SPDL1Q96EA4 605 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 PPP2R2CQ9Y2T4 447 aa7.46□□□□□ -1.22
RIPK1-202ENST00000380409 ATP5JP18859 108 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 PPFIA1Q13136 1202 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 TBX2Q13207 712 aaPredicted RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC40Q4G0X9 1142 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC178Q5BJE1 867 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 FUKQ8N0W3 1084 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 STK11IPQ8N1F8 1099 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 NME8Q8N427 588 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 XPO4Q9C0E2 1151 aaKnown RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 TPX2Q9ULW0 747 aaKnown RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 PPLO60437 1756 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 MROH1Q8NDA8 1641 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 FCHSD2O94868 740 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 FMNL1O95466 1100 aaPredicted RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 MYL1P05976 194 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 ZKSCAN1P17029 563 aaPredicted RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 SFPQP23246 707 aaKnown RBP eCLIP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 RDXP35241 583 aaKnown RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 ZC3H6P61129 1189 aaKnown RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 ZBED6P86452 979 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 STK3Q13188 491 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 THEMIS2Q5TEJ8 643 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 CDC37L1Q7L3B6 337 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 DZIP3Q86Y13 1208 aaKnown RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 PARP9Q8IXQ6 854 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 LIMCH1Q9UPQ0 1083 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 KIF1BO60333 1816 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 CYP27B1O15528 508 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 VAMP4O75379 141 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 TUBBP07437 444 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 ARHGAP25P42331 645 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 ROR2Q01974 943 aaKnown RBP7.45□□□□□ -1.22
RIPK1-202ENST00000380409 NEXNQ0ZGT2 675 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 LAMB3Q13751 1172 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 CYB5D1Q6P9G0 228 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 KIRREL3Q8IZU9 778 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 STRN4Q9NRL3 753 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 SNX14Q9Y5W7 946 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 CCDC61Q9Y6R9 512 aa7.45□□□□□ -1.22
RIPK1-202ENST00000380409 MYH13Q9UKX3 1938 aa7.44□□□□□ -1.22
RIPK1-202ENST00000380409 GOLGA6L9A6NEM1 432 aa7.44□□□□□ -1.22
RIPK1-202ENST00000380409 SRRM3A6NNA2 597 aaPredicted RBP7.44□□□□□ -1.22
RIPK1-202ENST00000380409 ERLIN1O75477 346 aa7.44□□□□□ -1.22
RIPK1-202ENST00000380409 RNF8O76064 485 aa7.44□□□□□ -1.22
RIPK1-202ENST00000380409 MYL6BP14649 208 aa7.44□□□□□ -1.22
RIPK1-202ENST00000380409 INHBCP55103 352 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms