RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 TMEM88BA6NKF7 163 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 HIP1O00291 1037 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 CELF2O95319 508 aaKnown RBP14.35□□□□□ -0.11
PCNA-201ENST00000379143 RGS3P49796 1198 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 DYNLL1P63167 89 aaKnown RBP14.35□□□□□ -0.11
PCNA-201ENST00000379143 TCP10Q12799 353 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 NFIAQ12857 509 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 CRNKL1Q9BZJ0 848 aaKnown RBP14.35□□□□□ -0.11
PCNA-201ENST00000379143 TMEM39BQ9GZU3 492 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 FAM198AQ9UFP1 575 aa14.35□□□□□ -0.11
PCNA-201ENST00000379143 COL2A1P02458 1487 aaPredicted RBP14.34□□□□□ -0.11
PCNA-201ENST00000379143 FOCADQ5VW36 1801 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
PCNA-201ENST00000379143 USP5P45974 858 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 FKBP1BP68106 108 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 PICALMQ13492 652 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 C2orf69Q8N8R5 385 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 TEPSINQ96N21 525 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 PUS7LQ9H0K6 701 aaKnown RBP14.34□□□□□ -0.11
PCNA-201ENST00000379143 ZNF408Q9H9D4 720 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
PCNA-201ENST00000379143 ATRNL1Q5VV63 1379 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 PPP1R12BO60237 982 aaPredicted RBP14.33□□□□□ -0.12
PCNA-201ENST00000379143 MBD4O95243 580 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 GNAT2P19087 354 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 SDSP20132 328 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 ZMYM1Q5SVZ6 1142 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 PRAMEF18Q5VWM3 479 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 CST9Q5W186 159 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 ZSCAN29Q8IWY8 852 aaPredicted RBP14.33□□□□□ -0.12
PCNA-201ENST00000379143 LCORLQ8N3X6 602 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 TGFBRAP1Q8WUH2 860 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 OSBPL5Q9H0X9 879 aaPredicted RBP14.33□□□□□ -0.12
PCNA-201ENST00000379143 DHX36Q9H2U1 1008 aaKnown RBP14.33□□□□□ -0.12
PCNA-201ENST00000379143 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
PCNA-201ENST00000379143 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.12
PCNA-201ENST00000379143 FLT1P17948 1338 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 CDK5RAP2Q96SN8 1893 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 CHGBP05060 677 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 FMR1Q06787 632 aaKnown RBP eCLIP14.32□□□□□ -0.12
PCNA-201ENST00000379143 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 NBPF12Q5TAG4 269 aaPredicted RBP14.32□□□□□ -0.12
PCNA-201ENST00000379143 DCAF15Q66K64 600 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 DLK2Q6UY11 383 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 GBA2Q9HCG7 927 aaPredicted RBP14.32□□□□□ -0.12
PCNA-201ENST00000379143 DIAPH3Q9NSV4 1193 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 ATP8A2Q9NTI2 1148 aa14.32□□□□□ -0.12
PCNA-201ENST00000379143 PAPPA2Q9BXP8 1791 aa14.31□□□□□ -0.12
PCNA-201ENST00000379143 GPAA1O43292 621 aa14.31□□□□□ -0.12
PCNA-201ENST00000379143 ARMC9Q7Z3E5 817 aa14.31□□□□□ -0.12
PCNA-201ENST00000379143 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
PCNA-201ENST00000379143 CSRNP1Q96S65 589 aa14.31□□□□□ -0.12
PCNA-201ENST00000379143 STRBPQ96SI9 672 aaKnown RBP14.31□□□□□ -0.12
PCNA-201ENST00000379143 UNCXA6NJT0 531 aa14.3□□□□□ -0.12
PCNA-201ENST00000379143 HLA-DOAP06340 250 aa14.3□□□□□ -0.12
PCNA-201ENST00000379143 VEGFBP49765 207 aa14.3□□□□□ -0.12
PCNA-201ENST00000379143 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
PCNA-201ENST00000379143 TTLL12Q14166 644 aaPredicted RBP14.3□□□□□ -0.12
PCNA-201ENST00000379143 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
PCNA-201ENST00000379143 ZFPM1Q8IX07 1006 aa14.3□□□□□ -0.12
PCNA-201ENST00000379143 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
PCNA-201ENST00000379143 ABT1Q9ULW3 272 aaKnown RBP14.3□□□□□ -0.12
PCNA-201ENST00000379143 SLC4A4Q9Y6R1 1079 aa14.3□□□□□ -0.12
PCNA-201ENST00000379143 SSC5DA1L4H1 1573 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
PCNA-201ENST00000379143 M0R2C6 588 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 SLC34A2O95436 690 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 IREB2P48200 963 aaKnown RBP14.29□□□□□ -0.12
PCNA-201ENST00000379143 CTCFP49711 727 aaPredicted RBP14.29□□□□□ -0.12
PCNA-201ENST00000379143 MAP3K11Q16584 847 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 GIMAP6Q6P9H5 292 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 TTC6Q86TZ1 520 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 AMOTL1Q8IY63 956 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 SDR42E1Q8WUS8 393 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 RUFY2Q8WXA3 655 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 DCP1AQ9NPI6 582 aaPredicted RBP14.29□□□□□ -0.12
PCNA-201ENST00000379143 HERC5Q9UII4 1024 aaKnown RBP14.29□□□□□ -0.12
PCNA-201ENST00000379143 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 TLL2Q9Y6L7 1015 aa14.29□□□□□ -0.12
PCNA-201ENST00000379143 NAV1Q8NEY1 1877 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 A0A0D9SFI3 127 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
PCNA-201ENST00000379143 TBC1D12O60347 775 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
PCNA-201ENST00000379143 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 SAPCD2Q86UD0 394 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 SKAP1Q86WV1 359 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 FAM227BQ96M60 508 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 SEC62Q99442 399 aaKnown RBP14.28□□□□□ -0.12
PCNA-201ENST00000379143 ZNF341Q9BYN7 854 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 NACAP1Q9BZK3 213 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 WBP1LQ9NX94 342 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms