RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ANAPC4Q9UJX5 808 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 ANKRD31Q8N7Z5 1873 aa22.74■■□□□ 1.23
SSU72-204ENST00000378726 GRIK5Q16478 980 aa22.73■■□□□ 1.23
SSU72-204ENST00000378726 USP48Q86UV5 1035 aa22.73■■□□□ 1.23
SSU72-204ENST00000378726 FERMT3Q86UX7 667 aa22.73■■□□□ 1.23
SSU72-204ENST00000378726 CNPY2Q9Y2B0 182 aa22.73■■□□□ 1.23
SSU72-204ENST00000378726 DHX16O60231 1041 aaKnown RBP22.73■■□□□ 1.23
SSU72-204ENST00000378726 ZNF500O60304 480 aaPredicted RBP22.73■■□□□ 1.23
SSU72-204ENST00000378726 RAB11FIP4Q86YS3 637 aa22.73■■□□□ 1.23
SSU72-204ENST00000378726 MPNDQ8N594 471 aa22.73■■□□□ 1.23
SSU72-204ENST00000378726 ZNF622Q969S3 477 aaKnown RBP eCLIP22.73■■□□□ 1.23
SSU72-204ENST00000378726 IFIT3O14879 490 aaKnown RBP22.72■■□□□ 1.23
SSU72-204ENST00000378726 TMEM67Q5HYA8 995 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 OLFM4Q6UX06 510 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 RIMBP2O15034 1052 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 PPFIA3O75145 1194 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 GADD45BO75293 160 aaPredicted RBP22.72■■□□□ 1.23
SSU72-204ENST00000378726 GSTO1P78417 241 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 DNM1Q05193 864 aaKnown RBP22.72■■□□□ 1.23
SSU72-204ENST00000378726 CTR9Q6PD62 1173 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 TMX4Q9H1E5 349 aaPredicted RBP22.72■■□□□ 1.23
SSU72-204ENST00000378726 SENP2Q9HC62 589 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 ATP8A2Q9NTI2 1148 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 KIF3AQ9Y496 699 aa22.72■■□□□ 1.23
SSU72-204ENST00000378726 RGPD3A6NKT7 1758 aaPredicted RBP22.71■■□□□ 1.23
SSU72-204ENST00000378726 RGPD4Q7Z3J3 1758 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 CYP2D7A0A087X1C5 515 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 USP17L12C9JPN9 530 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 USP17L21D6R901 530 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 H3BQV1 296 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 SMIM22K7EJ46 135 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 IFFO2Q5TF58 517 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 LY9Q9HBG7 655 aa22.71■■□□□ 1.23
SSU72-204ENST00000378726 DCP1AQ9NPI6 582 aaPredicted RBP22.71■■□□□ 1.23
SSU72-204ENST00000378726 LIFRP42702 1097 aa22.7■■□□□ 1.23
SSU72-204ENST00000378726 NFXL1Q6ZNB6 911 aa22.7■■□□□ 1.23
SSU72-204ENST00000378726 C2CD5Q86YS7 1000 aa22.7■■□□□ 1.23
SSU72-204ENST00000378726 ZKSCAN5Q9Y2L8 839 aa22.7■■□□□ 1.23
SSU72-204ENST00000378726 SF3B2Q13435 895 aaKnown RBP22.7■■□□□ 1.22
SSU72-204ENST00000378726 DIXDC1Q155Q3 683 aa22.7■■□□□ 1.22
SSU72-204ENST00000378726 SGMS1Q86VZ5 419 aa22.7■■□□□ 1.22
SSU72-204ENST00000378726 ZC3H12CQ9C0D7 883 aaKnown RBP22.7■■□□□ 1.22
SSU72-204ENST00000378726 H0YIN7 160 aa22.69■■□□□ 1.22
SSU72-204ENST00000378726 CPLX1O14810 134 aa22.69■■□□□ 1.22
SSU72-204ENST00000378726 LDHCP07864 332 aa22.69■■□□□ 1.22
SSU72-204ENST00000378726 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
SSU72-204ENST00000378726 TSPY26PQ9H489 355 aa22.69■■□□□ 1.22
SSU72-204ENST00000378726 APOA5Q6Q788 366 aa22.69■■□□□ 1.22
SSU72-204ENST00000378726 ZKSCAN3Q9BRR0 538 aa22.69■■□□□ 1.22
SSU72-204ENST00000378726 ZMYND15Q9H091 742 aa22.69■■□□□ 1.22
SSU72-204ENST00000378726 R3HCC1Q9Y3T6 440 aaKnown RBP22.69■■□□□ 1.22
SSU72-204ENST00000378726 BAG3O95817 575 aa22.68■■□□□ 1.22
SSU72-204ENST00000378726 FDPSP14324 419 aaKnown RBP22.68■■□□□ 1.22
SSU72-204ENST00000378726 SART3Q15020 963 aaKnown RBP22.68■■□□□ 1.22
SSU72-204ENST00000378726 TMEM87AQ8NBN3 555 aa22.68■■□□□ 1.22
SSU72-204ENST00000378726 BAG6P46379 1132 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 METAP2P50579 478 aaKnown RBP eCLIP22.67■■□□□ 1.22
SSU72-204ENST00000378726 MFSD14BQ5SR56 506 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 FAM173BQ6P4H8 233 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 DEFB132Q7Z7B7 95 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 ESR2Q92731 530 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 COA1Q9GZY4 146 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 CCDC88AQ3V6T2 1871 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 FIBPO43427 364 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 RXRAP19793 462 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 TBC1D22AQ8WUA7 517 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 MTA3Q9BTC8 594 aa22.67■■□□□ 1.22
SSU72-204ENST00000378726 TIAM2Q8IVF5 1701 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 ERICH2A1L162 156 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 CCDC69A6NI79 296 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 ZBTB43O43298 467 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 ADD1P35611 737 aaKnown RBP22.66■■□□□ 1.22
SSU72-204ENST00000378726 PPP4CP60510 307 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 CCDC39Q9UFE4 941 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 SLC12A7Q9Y666 1083 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 TCHHQ07283 1943 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 FOSBP53539 338 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 GTF2IP78347 998 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 WTAPQ15007 396 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 MICU3Q86XE3 530 aa22.66■■□□□ 1.22
SSU72-204ENST00000378726 SH3RF3Q8TEJ3 882 aaPredicted RBP22.66■■□□□ 1.22
SSU72-204ENST00000378726 SYAP1Q96A49 352 aaPredicted RBP22.66■■□□□ 1.22
SSU72-204ENST00000378726 NOL10Q9BSC4 688 aaKnown RBP22.66■■□□□ 1.22
SSU72-204ENST00000378726 FGRP09769 529 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 PCP11498 1178 aaKnown RBP22.65■■□□□ 1.22
SSU72-204ENST00000378726 TERF1P54274 439 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 SBK1Q52WX2 424 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 STYK1Q6J9G0 422 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 TMTC2Q8N394 836 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 FAM205AQ6ZU69 1335 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 LRRC37AA6NMS7 1700 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 MROH7-TTC4A0A0A0MT08 1334 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 USP5P45974 858 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 CSPP1Q1MSJ5 1256 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 SYNE3Q6ZMZ3 975 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 ZSCAN16Q9H4T2 348 aaPredicted RBP22.65■■□□□ 1.22
SSU72-204ENST00000378726 MCM9Q9NXL9 1143 aa22.65■■□□□ 1.22
SSU72-204ENST00000378726 ORC3Q9UBD5 711 aaPredicted RBP22.65■■□□□ 1.22
SSU72-204ENST00000378726 ARPP21Q9UBL0 812 aaPredicted RBP22.65■■□□□ 1.22
SSU72-204ENST00000378726 RANBP6O60518 1105 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms