RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 RHBDL3P58872 404 aa20.81■□□□□ 0.92
RER1-202ENST00000378512 CLASRPQ8N2M8 674 aaKnown RBP20.81■□□□□ 0.92
RER1-202ENST00000378512 BRI3BPQ8WY22 251 aa20.81■□□□□ 0.92
RER1-202ENST00000378512 ZKSCAN4Q969J2 545 aaPredicted RBP20.81■□□□□ 0.92
RER1-202ENST00000378512 OTUD5Q96G74 571 aa20.81■□□□□ 0.92
RER1-202ENST00000378512 SNRKQ9NRH2 765 aa20.81■□□□□ 0.92
RER1-202ENST00000378512 SNCAIPQ9Y6H5 919 aa20.81■□□□□ 0.92
RER1-202ENST00000378512 WDHD1O75717 1129 aaPredicted RBP20.8■□□□□ 0.92
RER1-202ENST00000378512 MAP4K4O95819 1239 aaPredicted RBP20.8■□□□□ 0.92
RER1-202ENST00000378512 ZAP70P43403 619 aa20.8■□□□□ 0.92
RER1-202ENST00000378512 GSTO1P78417 241 aa20.8■□□□□ 0.92
RER1-202ENST00000378512 PKN2Q16513 984 aaKnown RBP20.8■□□□□ 0.92
RER1-202ENST00000378512 ENTPD3O75355 529 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 NPM3O75607 178 aaKnown RBP20.79■□□□□ 0.92
RER1-202ENST00000378512 LDHCP07864 332 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 BTDP43251 543 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 TCP10Q12799 353 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 FBXO46Q6PJ61 603 aaPredicted RBP20.79■□□□□ 0.92
RER1-202ENST00000378512 MIGA2Q7L4E1 593 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 HOOK2Q96ED9 719 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 WRNIP1Q96S55 665 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 ATRNL1Q5VV63 1379 aa20.79■□□□□ 0.92
RER1-202ENST00000378512 CD99L2Q8TCZ2 262 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.78■□□□□ 0.92
RER1-202ENST00000378512 DCTPP1Q9H773 170 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 RAI14Q9P0K7 980 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 LRP2BPQ9P2M1 347 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 CSADQ9Y600 493 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 CCL15-CCL14A0A0B4J2E2 113 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 CCL15Q16663 113 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 OTOP1Q7RTM1 612 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 ZFPM1Q8IX07 1006 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 FAM43AQ8N2R8 423 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
RER1-202ENST00000378512 TRIM17Q9Y577 477 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
RER1-202ENST00000378512 COL2A1P02458 1487 aaPredicted RBP20.77■□□□□ 0.92
RER1-202ENST00000378512 SPDYE5A6NIY4 337 aa20.77■□□□□ 0.91
RER1-202ENST00000378512 INPP5BP32019 993 aa20.77■□□□□ 0.91
RER1-202ENST00000378512 RGS3P49796 1198 aa20.77■□□□□ 0.91
RER1-202ENST00000378512 MAP3K10Q02779 954 aa20.77■□□□□ 0.91
RER1-202ENST00000378512 TMED8Q6PL24 325 aaPredicted RBP20.77■□□□□ 0.91
RER1-202ENST00000378512 DDX4Q9NQI0 724 aaKnown RBP20.77■□□□□ 0.91
RER1-202ENST00000378512 PPP4CP60510 307 aa20.76■□□□□ 0.91
RER1-202ENST00000378512 LRRCC1Q9C099 1032 aa20.76■□□□□ 0.91
RER1-202ENST00000378512 ZNF112Q9UJU3 913 aa20.76■□□□□ 0.91
RER1-202ENST00000378512 APBB1O00213 710 aa20.75■□□□□ 0.91
RER1-202ENST00000378512 DCAF15Q66K64 600 aa20.75■□□□□ 0.91
RER1-202ENST00000378512 NAA16Q6N069 864 aaPredicted RBP20.75■□□□□ 0.91
RER1-202ENST00000378512 SH3BP5LQ7L8J4 393 aa20.75■□□□□ 0.91
RER1-202ENST00000378512 ADGRA1Q86SQ6 560 aa20.75■□□□□ 0.91
RER1-202ENST00000378512 SIPA1L1O43166 1804 aa20.75■□□□□ 0.91
RER1-202ENST00000378512 IFIT2P09913 472 aaKnown RBP20.74■□□□□ 0.91
RER1-202ENST00000378512 SLURP2P0DP57 97 aa20.74■□□□□ 0.91
RER1-202ENST00000378512 GTF2A2P52657 109 aa20.74■□□□□ 0.91
RER1-202ENST00000378512 OTUD7BQ6GQQ9 843 aa20.74■□□□□ 0.91
RER1-202ENST00000378512 CRBNQ96SW2 442 aa20.74■□□□□ 0.91
RER1-202ENST00000378512 ANTXR1Q9H6X2 564 aa20.74■□□□□ 0.91
RER1-202ENST00000378512 MYH7P12883 1935 aa20.74■□□□□ 0.91
RER1-202ENST00000378512 CENPFP49454 3210 aa20.73■□□□□ 0.91
RER1-202ENST00000378512 IRF6O14896 467 aa20.73■□□□□ 0.91
RER1-202ENST00000378512 ERO1BQ86YB8 467 aa20.73■□□□□ 0.91
RER1-202ENST00000378512 ZNF341Q9BYN7 854 aa20.73■□□□□ 0.91
RER1-202ENST00000378512 NDUFB9Q9Y6M9 179 aa20.73■□□□□ 0.91
RER1-202ENST00000378512 ZSWIM8A7E2V4 1837 aa20.73■□□□□ 0.91
RER1-202ENST00000378512 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
RER1-202ENST00000378512 ATP5JP18859 108 aa20.72■□□□□ 0.91
RER1-202ENST00000378512 SP3Q02447 781 aa20.72■□□□□ 0.91
RER1-202ENST00000378512 TAF1CQ15572 869 aaPredicted RBP20.72■□□□□ 0.91
RER1-202ENST00000378512 BTBD19C9JJ37 291 aa20.71■□□□□ 0.91
RER1-202ENST00000378512 AAMPQ13685 434 aa20.71■□□□□ 0.91
RER1-202ENST00000378512 ERO1AQ96HE7 468 aa20.71■□□□□ 0.91
RER1-202ENST00000378512 DOCK1Q14185 1865 aa20.7■□□□□ 0.91
RER1-202ENST00000378512 PHF20L1A8MW92 1017 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 BAG3O95817 575 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 PLCG2P16885 1265 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 TTF1Q15361 905 aaPredicted RBP20.7■□□□□ 0.9
RER1-202ENST00000378512 AATFQ9NY61 560 aaKnown RBP eCLIP20.7■□□□□ 0.99e-8■□□□□ 9.1
RER1-202ENST00000378512 PTPN22Q9Y2R2 807 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 PHIPQ8WWQ0 1821 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 TBC1D12O60347 775 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 IDH1O75874 414 aaKnown RBP20.7■□□□□ 0.9
RER1-202ENST00000378512 PPIL2Q13356 520 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 NOL9Q5SY16 702 aaKnown RBP20.7■□□□□ 0.9
RER1-202ENST00000378512 SH3RF3Q8TEJ3 882 aaPredicted RBP20.7■□□□□ 0.9
RER1-202ENST00000378512 OSBPL5Q9H0X9 879 aaPredicted RBP20.7■□□□□ 0.9
RER1-202ENST00000378512 EFCC1Q9HA90 598 aa20.7■□□□□ 0.9
RER1-202ENST00000378512 MYH1P12882 1939 aa20.69■□□□□ 0.9
RER1-202ENST00000378512 SMARCA5O60264 1052 aaPredicted RBP20.69■□□□□ 0.9
RER1-202ENST00000378512 CETPP11597 493 aa20.69■□□□□ 0.9
RER1-202ENST00000378512 MAP3K12Q12852 859 aa20.69■□□□□ 0.9
RER1-202ENST00000378512 SNAPC2Q13487 334 aa20.69■□□□□ 0.9
RER1-202ENST00000378512 PICALMQ13492 652 aa20.69■□□□□ 0.9
RER1-202ENST00000378512 DDX60LQ5H9U9 1706 aaKnown RBP20.69■□□□□ 0.9
RER1-202ENST00000378512 CERS3Q8IU89 383 aa20.69■□□□□ 0.9
RER1-202ENST00000378512 ZFYVE28Q9HCC9 887 aa20.69■□□□□ 0.9
RER1-202ENST00000378512 ATAD5Q96QE3 1844 aa20.68■□□□□ 0.9
RER1-202ENST00000378512 POTEFA5A3E0 1075 aa20.68■□□□□ 0.9
RER1-202ENST00000378512 ECM2O94769 699 aaPredicted RBP20.68■□□□□ 0.9
RER1-202ENST00000378512 TEX11Q8IYF3 940 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms