RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 SWT1Q5T5J6 900 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 SH2D3CQ8N5H7 860 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 SAR1BQ9Y6B6 198 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 YTHDC2Q9H6S0 1430 aaKnown RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 TULP1O00294 542 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 ARHGAP25P42331 645 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 RNASE9P60153 205 aaKnown RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 SMYD4Q8IYR2 804 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 PHKBQ93100 1093 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 TTF2Q9UNY4 1162 aaKnown RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 IDEP14735 1019 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 TTC39AQ5SRH9 613 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 EEF2KMTQ96G04 330 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 C19orf44Q9H6X5 657 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 ZNHIT6Q9NWK9 470 aaKnown RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 TFR2Q9UP52 801 aa11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 ZNF330Q9Y3S2 320 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF39-201ENST00000378387 CLTCL1P53675 1640 aa11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 CDC25AP30304 524 aa11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 TUBB4BP68371 445 aa11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 PDE4BQ07343 736 aa11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 HLTFQ14527 1009 aaKnown RBP eCLIP11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 KCND1Q9NSA2 647 aa11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 TRIM10Q9UDY6 481 aa11.9□□□□□ -0.51
ARHGEF39-201ENST00000378387 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 ZPR1O75312 459 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 C2orf54Q08AI8 447 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 CCDC40Q4G0X9 1142 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 RRP12Q5JTH9 1297 aaKnown RBP11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 SERTAD1Q9UHV2 236 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 NLRP6P59044 892 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 IQCEQ6IPM2 695 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 CNGA4Q8IV77 575 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 COG1Q8WTW3 980 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 RIPOR2Q9Y4F9 1068 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 BACH1O14867 736 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 TRPM2O94759 1503 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 CFAP58Q5T655 872 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 PREX2Q70Z35 1606 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 RSRC1Q96IZ7 334 aaKnown RBP11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 TACO1Q9BSH4 297 aaKnown RBP11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 KLC4Q9NSK0 619 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 TAB2Q9NYJ8 693 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 HPCAL4Q9UM19 191 aa11.89□□□□□ -0.51
ARHGEF39-201ENST00000378387 CDC42BPBQ9Y5S2 1711 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 CARMIL3Q8ND23 1372 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 PRC1O43663 620 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 ABL1P00519 1130 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 POLA2Q14181 598 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 POSTNQ15063 836 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 AP1ARQ63HQ0 302 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 SHROOM2Q13796 1616 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 ENO4A6NNW6 628 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 GUCY2FP51841 1108 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 CKAP4Q07065 602 aaKnown RBP11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 SNCBQ16143 134 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 MSL1Q68DK7 614 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 BRAPQ7Z569 592 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 IQGAP3Q86VI3 1631 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 ADGRB2O60241 1585 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 WASLO00401 505 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 BUB1BO60566 1050 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 CTDNEP1O95476 244 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 CASP1P29466 404 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 GUCY1A3Q02108 690 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 JAKMIP2Q96AA8 810 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 MMS19Q96T76 1030 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 BPIFA3Q9BQP9 254 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
ARHGEF39-201ENST00000378387 MAP3K5Q99683 1374 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 E7EWF7 191 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 SEC24CP53992 1094 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 UBXN1Q04323 297 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 IMMTQ16891 758 aaKnown RBP11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 CCDC96Q2M329 555 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 RNF217Q8TC41 542 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 SASH1O94885 1247 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 CXCR5P32302 372 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 PAFAH1B1P43034 410 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 TFCP2Q12800 502 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms