RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 KARSQ15046 597 aaKnown RBP20.67■□□□□ 0.9
GNE-201ENST00000377902 TEX35Q5T0J7 233 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 TC2NQ8N9U0 490 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 ARGLU1Q9NWB6 273 aaPredicted RBP20.67■□□□□ 0.9
GNE-201ENST00000377902 MAN1B1Q9UKM7 699 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 KCNJ14Q9UNX9 436 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 NFE2L3Q9Y4A8 694 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 A0A0U1RQJ8 604 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 ARHGAP6O43182 974 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 CASQ1P31415 396 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 IGDCC4Q8TDY8 1250 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 ATRIPQ8WXE1 791 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 MED15Q96RN5 788 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 SEC31BQ9NQW1 1179 aa20.67■□□□□ 0.9
GNE-201ENST00000377902 C1orf167Q5SNV9 1468 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 ZBTB43O43298 467 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 CDK11BP21127 795 aaKnown RBP20.66■□□□□ 0.9
GNE-201ENST00000377902 ADD2P35612 726 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 TOB1P50616 345 aaPredicted RBP20.66■□□□□ 0.9
GNE-201ENST00000377902 ST5P78524 1137 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 ZSWIM4Q9H7M6 989 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 SAMSN1Q9NSI8 373 aaKnown RBP20.66■□□□□ 0.9
GNE-201ENST00000377902 SPEF2Q9C093 1822 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 POLR2DO15514 142 aaKnown RBP20.66■□□□□ 0.9
GNE-201ENST00000377902 ZSCAN12O43309 604 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 TBC1D8O95759 1140 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 ATP2B1P20020 1258 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 TBX2Q13207 712 aaPredicted RBP20.66■□□□□ 0.9
GNE-201ENST00000377902 METTL24Q5JXM2 366 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 NEK11Q8NG66 645 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
GNE-201ENST00000377902 FAM237AA0A1B0GTK4 181 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 GOLGA8AA7E2F4 631 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 CUTAO60888 179 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 CTDSPL2Q05D32 466 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 DHX8Q14562 1220 aaKnown RBP20.65■□□□□ 0.9
GNE-201ENST00000377902 LY9Q9HBG7 655 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.65■□□□□ 0.9
GNE-201ENST00000377902 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.65■□□□□ 0.9
GNE-201ENST00000377902 SERTAD1Q9UHV2 236 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 NUP188Q5SRE5 1749 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 DDX60Q8IY21 1712 aaKnown RBP20.65■□□□□ 0.9
GNE-201ENST00000377902 HNRNPH2P55795 449 aaKnown RBP20.65■□□□□ 0.9
GNE-201ENST00000377902 MAP3K9P80192 1104 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 IFIT5Q13325 482 aaKnown RBP20.65■□□□□ 0.9
GNE-201ENST00000377902 TRIM29Q14134 588 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 USP49Q70CQ1 688 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 WWC3Q9ULE0 1092 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 ZNF532Q9HCE3 1301 aa20.65■□□□□ 0.9
GNE-201ENST00000377902 GYS2P54840 703 aa20.64■□□□□ 0.9
GNE-201ENST00000377902 PPP2R3AQ06190 1150 aa20.64■□□□□ 0.9
GNE-201ENST00000377902 TMEM67Q5HYA8 995 aa20.64■□□□□ 0.9
GNE-201ENST00000377902 ZKSCAN3Q9BRR0 538 aa20.64■□□□□ 0.9
GNE-201ENST00000377902 ISCA1Q9BUE6 129 aa20.64■□□□□ 0.9
GNE-201ENST00000377902 CDKL5O76039 1030 aa20.64■□□□□ 0.89
GNE-201ENST00000377902 CC2D1AQ6P1N0 951 aaPredicted RBP20.64■□□□□ 0.89
GNE-201ENST00000377902 KRI1Q8N9T8 703 aaKnown RBP20.64■□□□□ 0.89
GNE-201ENST00000377902 DHX58Q96C10 678 aa20.64■□□□□ 0.89
GNE-201ENST00000377902 SRRTQ9BXP5 876 aaKnown RBP20.64■□□□□ 0.89
GNE-201ENST00000377902 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.89
GNE-201ENST00000377902 WDR19Q8NEZ3 1342 aa20.64■□□□□ 0.89
GNE-201ENST00000377902 IRX5P78411 483 aaPredicted RBP20.63■□□□□ 0.89
GNE-201ENST00000377902 TCIRG1Q13488 830 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 POSTNQ15063 836 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 KIFC2Q96AC6 838 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 MRPL44Q9H9J2 332 aaKnown RBP20.63■□□□□ 0.89
GNE-201ENST00000377902 ZSWIM5Q9P217 1185 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 GPTP24298 496 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 SPECC1LQ69YQ0 1117 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 LDHAL6AQ6ZMR3 332 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 PARD6BQ9BYG5 372 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.89
GNE-201ENST00000377902 GREM2Q9H772 168 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 TMEM51Q9NW97 253 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 MRFAP1Q9Y605 127 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 LAMB4A4D0S4 1761 aa20.63■□□□□ 0.89
GNE-201ENST00000377902 NR5A1Q13285 461 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 CPLX2Q6PUV4 134 aaKnown RBP20.62■□□□□ 0.89
GNE-201ENST00000377902 TEX13AQ9BXU3 409 aaPredicted RBP20.62■□□□□ 0.89
GNE-201ENST00000377902 PCDHB6Q9Y5E3 794 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 SOWAHDA6NJG2 315 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 ZNF18P17022 549 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 FCHSD1Q86WN1 690 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 NOSTRINQ8IVI9 506 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 MPHOSPH8Q99549 860 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 RIPOR2Q9Y4F9 1068 aa20.62■□□□□ 0.89
GNE-201ENST00000377902 TEX33O43247 280 aa20.61■□□□□ 0.89
GNE-201ENST00000377902 CASP1P29466 404 aa20.61■□□□□ 0.89
GNE-201ENST00000377902 OAS2P29728 719 aaKnown RBP20.61■□□□□ 0.89
GNE-201ENST00000377902 PHKA1P46020 1223 aa20.61■□□□□ 0.89
GNE-201ENST00000377902 CPLX3Q8WVH0 158 aa20.61■□□□□ 0.89
GNE-201ENST00000377902 SMARCE1Q969G3 411 aa20.61■□□□□ 0.89
GNE-201ENST00000377902 LZTFL1Q9NQ48 299 aa20.61■□□□□ 0.89
GNE-201ENST00000377902 RIC1Q4ADV7 1423 aa20.61■□□□□ 0.89
GNE-201ENST00000377902 SSRP1Q08945 709 aaKnown RBP20.61■□□□□ 0.89
GNE-201ENST00000377902 DIS3L2Q8IYB7 885 aaKnown RBP20.61■□□□□ 0.89
GNE-201ENST00000377902 FBXO2Q9UK22 296 aaPredicted RBP20.61■□□□□ 0.89
GNE-201ENST00000377902 COL18A1P39060 1754 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 SNAP23O00161 211 aa20.6■□□□□ 0.89
GNE-201ENST00000377902 IFIT3O14879 490 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms