RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ENTPD3O75355 529 aa14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 WDHD1O75717 1129 aaPredicted RBP14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 BAG3O95817 575 aa14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 INPP5BP32019 993 aa14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 DGKZQ13574 1117 aa14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 OTUD7BQ6GQQ9 843 aa14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 IFNL1Q8IU54 200 aa14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 SNCAIPQ9Y6H5 919 aa14.12□□□□□ -0.15
SMARCE1-203ENST00000377808 MAST2Q6P0Q8 1798 aa14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 RFX7Q2KHR2 1363 aa14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 DDTLA6NHG4 134 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 IGF2BP3O00425 579 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 ALDH1A1P00352 501 aa14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 INHBEP58166 350 aa14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 RHBDL3P58872 404 aa14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 SH3RF3Q8TEJ3 882 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 DNAJC2Q99543 621 aaKnown RBP14.11□□□□□ -0.15
SMARCE1-203ENST00000377808 DOCK2Q92608 1830 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 CCL15-CCL14A0A0B4J2E2 113 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 CYP7A1P22680 504 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 GTF2A2P52657 109 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 CCL15Q16663 113 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 ERO1BQ86YB8 467 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 MAGEB6Q8N7X4 407 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 ANTXR1Q9H6X2 564 aa14.1□□□□□ -0.15
SMARCE1-203ENST00000377808 SPDYE5A6NIY4 337 aa14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 SMARCA5O60264 1052 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 PLCG2P16885 1265 aa14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 MAP3K12Q12852 859 aa14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 SH3BP5LQ7L8J4 393 aa14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 ADGRA1Q86SQ6 560 aa14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 ZNF296Q8WUU4 475 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 LRRCC1Q9C099 1032 aa14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 MCOLN1Q9GZU1 580 aa14.09□□□□□ -0.15
SMARCE1-203ENST00000377808 GPR25O00155 361 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 GOLIM4O00461 696 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 MAP4K4O95819 1239 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 SLURP2P0DP57 97 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 DYNLL1P63167 89 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 PPIL2Q13356 520 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 MAPKAPK5Q8IW41 473 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 MIGA1Q8NAN2 632 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 TGFBRAP1Q8WUH2 860 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 ABHD8Q96I13 439 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 OSBPL5Q9H0X9 879 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 R3HDMLQ9H3Y0 253 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 PICK1Q9NRD5 415 aa14.08□□□□□ -0.16
SMARCE1-203ENST00000377808 FAM196BA6NMK8 535 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 IRF6O14896 467 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 PPATQ06203 517 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 SNAPC2Q13487 334 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 TTF1Q15361 905 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 BRI3BPQ8WY22 251 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 MS4A4AQ96JQ5 239 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 CRBNQ96SW2 442 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 PTPN18Q99952 460 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 TRIM34Q9BYJ4 488 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 BOLA2Q9H3K6 86 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■■■■ 27.2
SMARCE1-203ENST00000377808 ZNF112Q9UJU3 913 aa14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 MYO5AQ9Y4I1 1855 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-203ENST00000377808 ATRNL1Q5VV63 1379 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 CCDC85CA6NKD9 419 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 FKTNO75072 461 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 CETPP11597 493 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 USP5P45974 858 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 CRHR2Q13324 411 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 TAF1CQ15572 869 aaPredicted RBP14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 SLC4A8Q2Y0W8 1093 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 NOL9Q5SY16 702 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 CTU1Q7Z7A3 348 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 SCYL3Q8IZE3 742 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 FLT1P17948 1338 aa14.06□□□□□ -0.16
SMARCE1-203ENST00000377808 TESPA1A2RU30 521 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-203ENST00000377808 IGSF3O75054 1194 aa14.05□□□□□ -0.16
SMARCE1-203ENST00000377808 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-203ENST00000377808 FAM43AQ8N2R8 423 aa14.05□□□□□ -0.16
SMARCE1-203ENST00000377808 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMARCE1-203ENST00000377808 EDC3Q96F86 508 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-203ENST00000377808 PHF20L1A8MW92 1017 aa14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 PPP4CP60510 307 aa14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 SLC9C2Q5TAH2 1124 aa14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 CFHR5Q9BXR6 569 aa14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 ZFYVE28Q9HCC9 887 aa14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 PAG1Q9NWQ8 432 aa14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 PCDHB15Q9Y5E8 787 aa14.04□□□□□ -0.16
SMARCE1-203ENST00000377808 LAMB1P07942 1786 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 BTBD19C9JJ37 291 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 CTNND1O60716 968 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 HLA-DOAP06340 250 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 PDE6AP16499 860 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 PTPRAP18433 802 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 GPATCH3Q96I76 525 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 DHX36Q9H2U1 1008 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 DCTPP1Q9H773 170 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms