RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ADAMTS2O95450 1211 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM27-202ENST00000377199 NR5A1Q13285 461 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 CFAP100Q494V2 611 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 ATP6V1AP38606 617 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 TMEM87BQ96K49 555 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 NTRK3Q16288 839 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 DPF2Q92785 391 aa18.75■□□□□ 0.59
TRIM27-202ENST00000377199 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM27-202ENST00000377199 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 GSG1L2A8MUP6 293 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 KCNQ4P56696 695 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 FANCCQ00597 558 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 ZNF827Q17R98 1081 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 AKNAD1Q5T1N1 836 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 DIS3L2Q8IYB7 885 aaKnown RBP18.74■□□□□ 0.59
TRIM27-202ENST00000377199 GRAMD1CQ8IYS0 662 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 CCAR2Q8N163 923 aaKnown RBP18.74■□□□□ 0.59
TRIM27-202ENST00000377199 JMYQ8N9B5 988 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 NIP7Q9Y221 180 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRIM27-202ENST00000377199 CTIFO43310 598 aaKnown RBP18.74■□□□□ 0.59
TRIM27-202ENST00000377199 IGSF3O75054 1194 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 PRDM1O75626 825 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 NCAPHQ15003 741 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 PAXBP1Q9Y5B6 917 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
TRIM27-202ENST00000377199 NEMFO60524 1076 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 WTAPQ15007 396 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 PTPAQ15257 358 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 SLC4A8Q2Y0W8 1093 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 BICDL1Q6ZP65 573 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 RAI14Q9P0K7 980 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
TRIM27-202ENST00000377199 KCNH3Q9ULD8 1083 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 ERICH2A1L162 156 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
TRIM27-202ENST00000377199 RTN1Q16799 776 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 ABCC12Q96J65 1359 aa18.73■□□□□ 0.59
TRIM27-202ENST00000377199 FGFR2P21802 821 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 IGHMBP2P38935 993 aaKnown RBP18.72■□□□□ 0.59
TRIM27-202ENST00000377199 UBASH3AP57075 661 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 UTP14AQ9BVJ6 771 aaKnown RBP18.72■□□□□ 0.59
TRIM27-202ENST00000377199 SHANK3Q9BYB0 1731 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 AKAP11Q9UKA4 1901 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 BCL9O00512 1426 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 CYP2D7A0A087X1C5 515 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 CYP7A1P22680 504 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 IL6STP40189 918 aaPredicted RBP18.72■□□□□ 0.59
TRIM27-202ENST00000377199 GYG1P46976 350 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 SAFBQ15424 915 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRIM27-202ENST00000377199 ZNF34Q8IZ26 560 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 FAM177A1Q8N128 213 aaPredicted RBP18.72■□□□□ 0.59
TRIM27-202ENST00000377199 MAP3K14Q99558 947 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 NACAP1Q9BZK3 213 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 PCDHA5Q9Y5H7 936 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 GSDMDP57764 484 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 ADGRA1Q86SQ6 560 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 METTL16Q86W50 562 aaKnown RBP18.72■□□□□ 0.59
TRIM27-202ENST00000377199 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 FOXP4Q8IVH2 680 aaPredicted RBP18.72■□□□□ 0.59
TRIM27-202ENST00000377199 TRIM22Q8IYM9 498 aa18.72■□□□□ 0.59
TRIM27-202ENST00000377199 WDR19Q8NEZ3 1342 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 CRKLP46109 303 aaKnown RBP18.71■□□□□ 0.59
TRIM27-202ENST00000377199 NOSTRINQ8IVI9 506 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 OXER1Q8TDS5 423 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 ANKRD7Q92527 254 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 FANCLQ9NW38 375 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 TMEM232C9JQI7 657 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
TRIM27-202ENST00000377199 E4F1Q66K89 784 aaPredicted RBP18.71■□□□□ 0.59
TRIM27-202ENST00000377199 OLFM4Q6UX06 510 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 SYT10Q6XYQ8 523 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 TRMT44Q8IYL2 757 aaKnown RBP18.71■□□□□ 0.59
TRIM27-202ENST00000377199 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
TRIM27-202ENST00000377199 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 TMX1Q9H3N1 280 aa18.71■□□□□ 0.59
TRIM27-202ENST00000377199 POLR2DO15514 142 aaKnown RBP18.7■□□□□ 0.58
TRIM27-202ENST00000377199 CHRNDQ07001 517 aa18.7■□□□□ 0.58
TRIM27-202ENST00000377199 PCDHB6Q9Y5E3 794 aa18.7■□□□□ 0.58
TRIM27-202ENST00000377199 NYAP1Q6ZVC0 841 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 SGMS1Q86VZ5 419 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 KIF18AQ8NI77 898 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 KRT23Q9C075 422 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 CABP5Q9NP86 173 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 JAG2Q9Y219 1238 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 FAM205CA6NFA0 338 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 PPP6R2O75170 966 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 MYL5Q02045 173 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 PDE4BQ07343 736 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 RESP18Q5W5W9 173 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 USP49Q70CQ1 688 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 CCDC24Q8N4L8 307 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 KRI1Q8N9T8 703 aaKnown RBP18.69■□□□□ 0.58
TRIM27-202ENST00000377199 MYH7P12883 1935 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
TRIM27-202ENST00000377199 FMNL1O95466 1100 aaPredicted RBP18.69■□□□□ 0.58
TRIM27-202ENST00000377199 TOB1P50616 345 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms