RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 CWC27Q6UX04 472 aaKnown RBP20.32■□□□□ 0.84
HLA-F-218ENST00000376861 MAPKAPK5Q8IW41 473 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 CDCA5Q96FF9 252 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 TMEM39BQ9GZU3 492 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 SLC4A4Q9Y6R1 1079 aa20.32■□□□□ 0.84
HLA-F-218ENST00000376861 GPAA1O43292 621 aa20.31■□□□□ 0.84
HLA-F-218ENST00000376861 ITGBL1O95965 494 aaPredicted RBP20.31■□□□□ 0.84
HLA-F-218ENST00000376861 TTLL12Q14166 644 aaPredicted RBP20.31■□□□□ 0.84
HLA-F-218ENST00000376861 FAM198AQ9UFP1 575 aa20.31■□□□□ 0.84
HLA-F-218ENST00000376861 NPM3O75607 178 aaKnown RBP20.3■□□□□ 0.84
HLA-F-218ENST00000376861 CHMLP26374 656 aa20.3■□□□□ 0.84
HLA-F-218ENST00000376861 NMIQ13287 307 aaPredicted RBP20.3■□□□□ 0.84
HLA-F-218ENST00000376861 FAM227BQ96M60 508 aa20.3■□□□□ 0.84
HLA-F-218ENST00000376861 SEC62Q99442 399 aaKnown RBP20.3■□□□□ 0.84
HLA-F-218ENST00000376861 ATP8A2Q9NTI2 1148 aa20.3■□□□□ 0.84
HLA-F-218ENST00000376861 M0R2C6 588 aa20.29■□□□□ 0.84
HLA-F-218ENST00000376861 CELF2O95319 508 aaKnown RBP20.29■□□□□ 0.84
HLA-F-218ENST00000376861 SDR42E1Q8WUS8 393 aa20.29■□□□□ 0.84
HLA-F-218ENST00000376861 STRBPQ96SI9 672 aaKnown RBP20.29■□□□□ 0.84
HLA-F-218ENST00000376861 TRIM34Q9BYJ4 488 aa20.29■□□□□ 0.84
HLA-F-218ENST00000376861 NACAP1Q9BZK3 213 aa20.29■□□□□ 0.84
HLA-F-218ENST00000376861 OSBPL5Q9H0X9 879 aaPredicted RBP20.29■□□□□ 0.84
HLA-F-218ENST00000376861 FLT1P17948 1338 aa20.29■□□□□ 0.84
HLA-F-218ENST00000376861 PPP1R12BO60237 982 aaPredicted RBP20.28■□□□□ 0.84
HLA-F-218ENST00000376861 POLR3DP05423 398 aaPredicted RBP20.28■□□□□ 0.84
HLA-F-218ENST00000376861 HLA-DOAP06340 250 aa20.28■□□□□ 0.84
HLA-F-218ENST00000376861 C2orf69Q8N8R5 385 aa20.28■□□□□ 0.84
HLA-F-218ENST00000376861 CSRNP1Q96S65 589 aa20.28■□□□□ 0.84
HLA-F-218ENST00000376861 DHX36Q9H2U1 1008 aaKnown RBP20.28■□□□□ 0.84
HLA-F-218ENST00000376861 DDX4Q9NQI0 724 aaKnown RBP20.28■□□□□ 0.84
HLA-F-218ENST00000376861 SAP30BPQ9UHR5 308 aaKnown RBP20.28■□□□□ 0.84
HLA-F-218ENST00000376861 CNTNAP1P78357 1384 aa20.28■□□□□ 0.84
HLA-F-218ENST00000376861 TRPM7Q96QT4 1865 aa20.28■□□□□ 0.84
HLA-F-218ENST00000376861 CDK5RAP2Q96SN8 1893 aa20.28■□□□□ 0.84
HLA-F-218ENST00000376861 A0A0D9SFI3 127 aa20.27■□□□□ 0.84
HLA-F-218ENST00000376861 NBPF12Q5TAG4 269 aaPredicted RBP20.27■□□□□ 0.84
HLA-F-218ENST00000376861 DLK2Q6UY11 383 aa20.27■□□□□ 0.84
HLA-F-218ENST00000376861 MCM9Q9NXL9 1143 aa20.27■□□□□ 0.84
HLA-F-218ENST00000376861 FOCADQ5VW36 1801 aa20.27■□□□□ 0.84
HLA-F-218ENST00000376861 PRKG1Q13976 671 aa20.27■□□□□ 0.83
HLA-F-218ENST00000376861 DCAF15Q66K64 600 aa20.27■□□□□ 0.83
HLA-F-218ENST00000376861 CCDC129Q6ZRS4 1044 aa20.27■□□□□ 0.83
HLA-F-218ENST00000376861 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.83
HLA-F-218ENST00000376861 PRKAB2O43741 272 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 TDO2P48775 406 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 C1QTNF8P60827 252 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 FMR1Q06787 632 aaKnown RBP eCLIP20.26■□□□□ 0.83
HLA-F-218ENST00000376861 ARMC9Q7Z3E5 817 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 TTC6Q86TZ1 520 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 ZFPM1Q8IX07 1006 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
HLA-F-218ENST00000376861 PASKQ96RG2 1323 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
HLA-F-218ENST00000376861 MYH1P12882 1939 aa20.26■□□□□ 0.83
HLA-F-218ENST00000376861 NAV1Q8NEY1 1877 aa20.25■□□□□ 0.83
HLA-F-218ENST00000376861 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
HLA-F-218ENST00000376861 TMEM88BA6NKF7 163 aa20.25■□□□□ 0.83
HLA-F-218ENST00000376861 PATL2C9JE40 543 aaKnown RBP20.25■□□□□ 0.83
HLA-F-218ENST00000376861 SLC4A8Q2Y0W8 1093 aa20.25■□□□□ 0.83
HLA-F-218ENST00000376861 ESYT1Q9BSJ8 1104 aa20.25■□□□□ 0.83
HLA-F-218ENST00000376861 GBA2Q9HCG7 927 aaPredicted RBP20.25■□□□□ 0.83
HLA-F-218ENST00000376861 DCP1AQ9NPI6 582 aaPredicted RBP20.25■□□□□ 0.83
HLA-F-218ENST00000376861 PI4KBQ9UBF8 816 aa20.25■□□□□ 0.83
HLA-F-218ENST00000376861 PALD1Q9ULE6 856 aa20.25■□□□□ 0.83
HLA-F-218ENST00000376861 RAD50Q92878 1312 aa20.24■□□□□ 0.83
HLA-F-218ENST00000376861 DDTLA6NHG4 134 aaPredicted RBP20.24■□□□□ 0.83
HLA-F-218ENST00000376861 APLP1P51693 650 aa20.24■□□□□ 0.83
HLA-F-218ENST00000376861 TEPSINQ96N21 525 aa20.24■□□□□ 0.83
HLA-F-218ENST00000376861 NAPBQ9H115 298 aa20.24■□□□□ 0.83
HLA-F-218ENST00000376861 ABT1Q9ULW3 272 aaKnown RBP20.24■□□□□ 0.83
HLA-F-218ENST00000376861 REC8O95072 547 aa20.23■□□□□ 0.83
HLA-F-218ENST00000376861 SEC24BO95487 1268 aa20.23■□□□□ 0.83
HLA-F-218ENST00000376861 IREB2P48200 963 aaKnown RBP20.23■□□□□ 0.83
HLA-F-218ENST00000376861 GIMAP6Q6P9H5 292 aa20.23■□□□□ 0.83
HLA-F-218ENST00000376861 KIAA1211Q6ZU35 1233 aa20.23■□□□□ 0.83
HLA-F-218ENST00000376861 MIGA2Q7L4E1 593 aa20.23■□□□□ 0.83
HLA-F-218ENST00000376861 TSHZ2Q9NRE2 1034 aa20.23■□□□□ 0.83
HLA-F-218ENST00000376861 ATRNL1Q5VV63 1379 aa20.23■□□□□ 0.83
HLA-F-218ENST00000376861 FKBP1BP68106 108 aa20.22■□□□□ 0.83
HLA-F-218ENST00000376861 ARPP21Q9UBL0 812 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-218ENST00000376861 ANGEL1Q9UNK9 670 aaKnown RBP20.22■□□□□ 0.83
HLA-F-218ENST00000376861 COL2A1P02458 1487 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-218ENST00000376861 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
HLA-F-218ENST00000376861 CST9Q5W186 159 aa20.22■□□□□ 0.83
HLA-F-218ENST00000376861 ZNF589Q86UQ0 364 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-218ENST00000376861 CDAN1Q8IWY9 1227 aa20.22■□□□□ 0.83
HLA-F-218ENST00000376861 ZNF341Q9BYN7 854 aa20.22■□□□□ 0.83
HLA-F-218ENST00000376861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
HLA-F-218ENST00000376861 BAZ2AQ9UIF9 1905 aaKnown RBP20.21■□□□□ 0.83
HLA-F-218ENST00000376861 MINDY4BA8MYZ0 360 aa20.21■□□□□ 0.83
HLA-F-218ENST00000376861 USP17L12C9JPN9 530 aa20.21■□□□□ 0.83
HLA-F-218ENST00000376861 USP17L21D6R901 530 aa20.21■□□□□ 0.83
HLA-F-218ENST00000376861 SGSM2O43147 1006 aa20.21■□□□□ 0.83
HLA-F-218ENST00000376861 FOXP4Q8IVH2 680 aaPredicted RBP20.21■□□□□ 0.83
HLA-F-218ENST00000376861 IFNL3Q8IZI9 196 aa20.21■□□□□ 0.83
HLA-F-218ENST00000376861 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
HLA-F-218ENST00000376861 HERC5Q9UII4 1024 aaKnown RBP20.21■□□□□ 0.83
HLA-F-218ENST00000376861 SH3BP5LQ7L8J4 393 aa20.2■□□□□ 0.82
HLA-F-218ENST00000376861 SERPINB13Q9UIV8 391 aa20.2■□□□□ 0.82
HLA-F-218ENST00000376861 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms