RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 DHX16O60231 1041 aaKnown RBP20.76■□□□□ 0.91
CTTN-203ENST00000376561 LIFRP42702 1097 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 SGMS1Q86VZ5 419 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 SENP2Q9HC62 589 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 MROH7-TTC4A0A0A0MT08 1334 aa20.75■□□□□ 0.91
CTTN-203ENST00000376561 LAMB1P07942 1786 aa20.75■□□□□ 0.91
CTTN-203ENST00000376561 SLX4Q8IY92 1834 aa20.75■□□□□ 0.91
CTTN-203ENST00000376561 BAG3O95817 575 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 CHRNA5P30532 468 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 PPP4CP60510 307 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 APOA5Q6Q788 366 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 RAB11FIP4Q86YS3 637 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 MTA3Q9BTC8 594 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 KIF3AQ9Y496 699 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 GTF2IP78347 998 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 ESR2Q92731 530 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 GDPD2Q9HCC8 539 aa20.74■□□□□ 0.91
CTTN-203ENST00000376561 ARPP21Q9UBL0 812 aaPredicted RBP20.74■□□□□ 0.91
CTTN-203ENST00000376561 FGRP09769 529 aa20.73■□□□□ 0.91
CTTN-203ENST00000376561 PCP11498 1178 aaKnown RBP20.73■□□□□ 0.91
CTTN-203ENST00000376561 SART3Q15020 963 aaKnown RBP20.73■□□□□ 0.91
CTTN-203ENST00000376561 NFXL1Q6ZNB6 911 aa20.73■□□□□ 0.91
CTTN-203ENST00000376561 NOL10Q9BSC4 688 aaKnown RBP20.73■□□□□ 0.91
CTTN-203ENST00000376561 RTFDC1Q9BY42 306 aaPredicted RBP20.73■□□□□ 0.91
CTTN-203ENST00000376561 SBK1Q52WX2 424 aa20.73■□□□□ 0.91
CTTN-203ENST00000376561 FERMT3Q86UX7 667 aa20.73■□□□□ 0.91
CTTN-203ENST00000376561 SH3RF3Q8TEJ3 882 aaPredicted RBP20.73■□□□□ 0.91
CTTN-203ENST00000376561 CNKSR1Q969H4 720 aa20.73■□□□□ 0.91
CTTN-203ENST00000376561 ZKSCAN3Q9BRR0 538 aa20.73■□□□□ 0.91
CTTN-203ENST00000376561 CNPY2Q9Y2B0 182 aa20.73■□□□□ 0.91
CTTN-203ENST00000376561 PPFIA3O75145 1194 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 METAP2P50579 478 aaKnown RBP eCLIP20.72■□□□□ 0.91
CTTN-203ENST00000376561 EYA3Q99504 573 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 MKRN1Q9UHC7 482 aaKnown RBP20.72■□□□□ 0.91
CTTN-203ENST00000376561 H3BQV1 296 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 CPLX1O14810 134 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 FDPSP14324 419 aaKnown RBP20.72■□□□□ 0.91
CTTN-203ENST00000376561 DNM1Q05193 864 aaKnown RBP20.72■□□□□ 0.91
CTTN-203ENST00000376561 IFFO2Q5TF58 517 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 USP48Q86UV5 1035 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 CERS3Q8IU89 383 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 TMEM87AQ8NBN3 555 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 GPT2Q8TD30 523 aa20.72■□□□□ 0.91
CTTN-203ENST00000376561 ERICH2A1L162 156 aa20.71■□□□□ 0.91
CTTN-203ENST00000376561 CCDC69A6NI79 296 aa20.71■□□□□ 0.91
CTTN-203ENST00000376561 ZBTB43O43298 467 aa20.71■□□□□ 0.91
CTTN-203ENST00000376561 USP5P45974 858 aa20.71■□□□□ 0.91
CTTN-203ENST00000376561 EVX2Q03828 476 aa20.71■□□□□ 0.91
CTTN-203ENST00000376561 DOK7Q18PE1 504 aa20.71■□□□□ 0.91
CTTN-203ENST00000376561 FAM163AQ96GL9 167 aaPredicted RBP20.71■□□□□ 0.91
CTTN-203ENST00000376561 MCM9Q9NXL9 1143 aa20.71■□□□□ 0.91
CTTN-203ENST00000376561 GPR75-ASB3A0A0A6YYF3 556 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 WTAPQ15007 396 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 MICU3Q86XE3 530 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 SLF2Q8IX21 1173 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 SLC12A7Q9Y666 1083 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 CYP2D6P10635 497 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 NCLP19338 710 aaKnown RBP20.7■□□□□ 0.9
CTTN-203ENST00000376561 RXRAP19793 462 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 BTDP43251 543 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 UBAC1Q9BSL1 405 aa20.7■□□□□ 0.9
CTTN-203ENST00000376561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTTN-203ENST00000376561 PRDM1O75626 825 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 TMTC2Q8N394 836 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 SUGT1Q9Y2Z0 365 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 GAKO14976 1311 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 CDK5RAP2Q96SN8 1893 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 G3V3G9 751 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 ORC4O43929 436 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 SLC3A2P08195 630 aaKnown RBP20.69■□□□□ 0.9
CTTN-203ENST00000376561 USP17L8P0C7I0 530 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 CDC27P30260 824 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 ADD1P35611 737 aaKnown RBP20.69■□□□□ 0.9
CTTN-203ENST00000376561 DCAF8Q5TAQ9 597 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 MYL10Q9BUA6 226 aa20.69■□□□□ 0.9
CTTN-203ENST00000376561 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 FIBPO43427 364 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
CTTN-203ENST00000376561 MBD3O95983 291 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 SLC16A10Q8TF71 515 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 TGFBRAP1Q8WUH2 860 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 ZNF219Q9P2Y4 722 aaPredicted RBP20.68■□□□□ 0.9
CTTN-203ENST00000376561 NAV1Q8NEY1 1877 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 TNKSO95271 1327 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 GOLGA8AA7E2F4 631 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 RESTQ13127 1097 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 SEC23AQ15436 765 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 C12orf60Q5U649 245 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 FAM173BQ6P4H8 233 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 SYNE3Q6ZMZ3 975 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 CCDC144CPQ8IYA2 1237 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 CERS5Q8N5B7 392 aa20.68■□□□□ 0.9
CTTN-203ENST00000376561 ORC3Q9UBD5 711 aaPredicted RBP20.68■□□□□ 0.9
CTTN-203ENST00000376561 NID2Q14112 1375 aa20.67■□□□□ 0.9
CTTN-203ENST00000376561 PLCG2P16885 1265 aa20.67■□□□□ 0.9
CTTN-203ENST00000376561 FOSBP53539 338 aa20.67■□□□□ 0.9
CTTN-203ENST00000376561 ZSCAN16Q9H4T2 348 aaPredicted RBP20.67■□□□□ 0.9
CTTN-203ENST00000376561 FAM217BQ9NTX9 383 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms