RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 NBPF9Q3BBW0 867 aa27.29■■□□□ 1.96
HLA-C-202ENST00000376237 MCM9Q9NXL9 1143 aa27.29■■□□□ 1.96
HLA-C-202ENST00000376237 HACL1Q9UJ83 578 aa27.29■■□□□ 1.96
HLA-C-202ENST00000376237 ENTPD3O75355 529 aa27.28■■□□□ 1.96
HLA-C-202ENST00000376237 USP17L12C9JPN9 530 aa27.27■■□□□ 1.96
HLA-C-202ENST00000376237 USP17L21D6R901 530 aa27.27■■□□□ 1.96
HLA-C-202ENST00000376237 EGFRP00533 1210 aa27.27■■□□□ 1.96
HLA-C-202ENST00000376237 CYP21A2P08686 494 aa27.27■■□□□ 1.96
HLA-C-202ENST00000376237 PICALMQ13492 652 aa27.27■■□□□ 1.96
HLA-C-202ENST00000376237 TSGA10IPQ3SY00 556 aa27.27■■□□□ 1.96
HLA-C-202ENST00000376237 CTR9Q6PD62 1173 aa27.27■■□□□ 1.96
HLA-C-202ENST00000376237 NFIAQ12857 509 aa27.26■■□□□ 1.96
HLA-C-202ENST00000376237 OSBPL5Q9H0X9 879 aaPredicted RBP27.26■■□□□ 1.96
HLA-C-202ENST00000376237 CLRN2A0PK11 232 aa27.26■■□□□ 1.95
HLA-C-202ENST00000376237 KRT32Q14532 448 aa27.26■■□□□ 1.95
HLA-C-202ENST00000376237 DDX4Q9NQI0 724 aaKnown RBP27.26■■□□□ 1.95
HLA-C-202ENST00000376237 FAM198AQ9UFP1 575 aa27.26■■□□□ 1.95
HLA-C-202ENST00000376237 ANAPC4Q9UJX5 808 aa27.26■■□□□ 1.95
HLA-C-202ENST00000376237 CACNB3P54284 484 aa27.25■■□□□ 1.95
HLA-C-202ENST00000376237 TNFAIP1Q13829 316 aa27.25■■□□□ 1.95
HLA-C-202ENST00000376237 USP50Q70EL3 339 aaPredicted RBP27.25■■□□□ 1.95
HLA-C-202ENST00000376237 FAM83AQ86UY5 434 aa27.25■■□□□ 1.95
HLA-C-202ENST00000376237 TRPM4Q8TD43 1214 aa27.25■■□□□ 1.95
HLA-C-202ENST00000376237 IL17RAQ96F46 866 aa27.25■■□□□ 1.95
HLA-C-202ENST00000376237 DHX36Q9H2U1 1008 aaKnown RBP27.25■■□□□ 1.95
HLA-C-202ENST00000376237 MINDY4BA8MYZ0 360 aa27.24■■□□□ 1.95
HLA-C-202ENST00000376237 POLR3DP05423 398 aaPredicted RBP27.24■■□□□ 1.95
HLA-C-202ENST00000376237 TNNI2P48788 182 aa27.24■■□□□ 1.95
HLA-C-202ENST00000376237 PPARAQ07869 468 aa27.24■■□□□ 1.95
HLA-C-202ENST00000376237 C12orf60Q5U649 245 aa27.24■■□□□ 1.95
HLA-C-202ENST00000376237 TTC6Q86TZ1 520 aa27.24■■□□□ 1.95
HLA-C-202ENST00000376237 VEZTQ9HBM0 779 aa27.24■■□□□ 1.95
HLA-C-202ENST00000376237 SNX14Q9Y5W7 946 aa27.24■■□□□ 1.95
HLA-C-202ENST00000376237 SLC3A2P08195 630 aaKnown RBP27.23■■□□□ 1.95
HLA-C-202ENST00000376237 EPHX2P34913 555 aa27.23■■□□□ 1.95
HLA-C-202ENST00000376237 RASEFQ8IZ41 740 aa27.23■■□□□ 1.95
HLA-C-202ENST00000376237 FAM151AQ8WW52 585 aa27.23■■□□□ 1.95
HLA-C-202ENST00000376237 PALD1Q9ULE6 856 aa27.23■■□□□ 1.95
HLA-C-202ENST00000376237 HAND2P61296 217 aa27.22■■□□□ 1.95
HLA-C-202ENST00000376237 COL2A1P02458 1487 aaPredicted RBP27.22■■□□□ 1.95
HLA-C-202ENST00000376237 TCP10L2B9ZVM9 353 aa27.21■■□□□ 1.95
HLA-C-202ENST00000376237 PCP11498 1178 aaKnown RBP27.21■■□□□ 1.95
HLA-C-202ENST00000376237 HIRAP54198 1017 aaPredicted RBP27.21■■□□□ 1.95
HLA-C-202ENST00000376237 TCP10Q12799 353 aa27.21■■□□□ 1.95
HLA-C-202ENST00000376237 RNF41Q9H4P4 317 aaPredicted RBP27.21■■□□□ 1.95
HLA-C-202ENST00000376237 SAP30BPQ9UHR5 308 aaKnown RBP27.21■■□□□ 1.95
HLA-C-202ENST00000376237 TAOK2Q9UL54 1235 aa27.21■■□□□ 1.95
HLA-C-202ENST00000376237 ECM29Q5VYK3 1845 aa27.21■■□□□ 1.95
HLA-C-202ENST00000376237 WDR90Q96KV7 1748 aa27.21■■□□□ 1.95
HLA-C-202ENST00000376237 PNMA8AQ86V59 439 aaPredicted RBP27.21■■□□□ 1.95
HLA-C-202ENST00000376237 APOBEC3FQ8IUX4 373 aaKnown RBP27.21■■□□□ 1.95
HLA-C-202ENST00000376237 FOCADQ5VW36 1801 aa27.2■■□□□ 1.95
HLA-C-202ENST00000376237 PITPNM2Q9BZ72 1349 aa27.2■■□□□ 1.94
HLA-C-202ENST00000376237 HLA-DOAP06340 250 aa27.2■■□□□ 1.94
HLA-C-202ENST00000376237 PSMA5P28066 241 aa27.2■■□□□ 1.94
HLA-C-202ENST00000376237 IL27Q8NEV9 243 aa27.2■■□□□ 1.94
HLA-C-202ENST00000376237 ZC3H15Q8WU90 426 aaKnown RBP27.2■■□□□ 1.94
HLA-C-202ENST00000376237 TAF1DQ9H5J8 278 aaPredicted RBP27.2■■□□□ 1.94
HLA-C-202ENST00000376237 ATRNL1Q5VV63 1379 aa27.2■■□□□ 1.94
HLA-C-202ENST00000376237 CDK5RAP2Q96SN8 1893 aa27.19■■□□□ 1.94
HLA-C-202ENST00000376237 SCN4AP35499 1836 aa27.19■■□□□ 1.94
HLA-C-202ENST00000376237 POTECB2RU33 542 aa27.19■■□□□ 1.94
HLA-C-202ENST00000376237 E7EWF7 191 aa27.19■■□□□ 1.94
HLA-C-202ENST00000376237 AKNAD1Q5T1N1 836 aa27.19■■□□□ 1.94
HLA-C-202ENST00000376237 STAG1Q8WVM7 1258 aa27.19■■□□□ 1.94
HLA-C-202ENST00000376237 TM6SF1Q9BZW5 370 aa27.19■■□□□ 1.94
HLA-C-202ENST00000376237 CYP2D7A0A087X1C5 515 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 NT5C2P49902 561 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 PLCD1P51178 756 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 ANGEL2Q5VTE6 544 aaKnown RBP27.18■■□□□ 1.94
HLA-C-202ENST00000376237 MFSD6Q6ZSS7 791 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 ZSCAN29Q8IWY8 852 aaPredicted RBP27.18■■□□□ 1.94
HLA-C-202ENST00000376237 ZFPM1Q8IX07 1006 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 KIF2CQ99661 725 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 ZNF287Q9HBT7 754 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 PI4KBQ9UBF8 816 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 NAV1Q8NEY1 1877 aa27.18■■□□□ 1.94
HLA-C-202ENST00000376237 CNTNAP1P78357 1384 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 ROBO3Q96MS0 1386 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 CYP2D6P10635 497 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 VEGFAP15692 232 aaPredicted RBP27.17■■□□□ 1.94
HLA-C-202ENST00000376237 CTDSPL2Q05D32 466 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 PDE4BQ07343 736 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 TRDNQ13061 729 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 NBPF3Q9H094 633 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 EHD4Q9H223 541 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 CNNM2Q9H8M5 875 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 TSHZ2Q9NRE2 1034 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 GGA3Q9NZ52 723 aa27.17■■□□□ 1.94
HLA-C-202ENST00000376237 HMGB1P09429 215 aaKnown RBP27.16■■□□□ 1.94
HLA-C-202ENST00000376237 FGRP09769 529 aa27.16■■□□□ 1.94
HLA-C-202ENST00000376237 TBC1D10CQ8IV04 446 aa27.16■■□□□ 1.94
HLA-C-202ENST00000376237 FOXP4Q8IVH2 680 aaPredicted RBP27.16■■□□□ 1.94
HLA-C-202ENST00000376237 NEK1Q96PY6 1258 aa27.16■■□□□ 1.94
HLA-C-202ENST00000376237 TAF6LQ9Y6J9 622 aa27.16■■□□□ 1.94
HLA-C-202ENST00000376237 ASTN2O75129 1339 aaPredicted RBP27.16■■□□□ 1.94
HLA-C-202ENST00000376237 DDX60LQ5H9U9 1706 aaKnown RBP27.16■■□□□ 1.94
HLA-C-202ENST00000376237 BAZ2AQ9UIF9 1905 aaKnown RBP27.16■■□□□ 1.94
HLA-C-202ENST00000376237 RASA3Q14644 834 aa27.16■■□□□ 1.94
HLA-C-202ENST00000376237 NCOA7Q8NI08 942 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms