RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 GJB2P29033 226 aa13.08□□□□□ -0.31
PDPN-202ENST00000376057 FGD1P98174 961 aa13.08□□□□□ -0.31
PDPN-202ENST00000376057 SCRN1Q12765 414 aa13.08□□□□□ -0.31
PDPN-202ENST00000376057 PPP2R5BQ15173 497 aa13.08□□□□□ -0.31
PDPN-202ENST00000376057 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.31
PDPN-202ENST00000376057 ZSWIM5Q9P217 1185 aa13.08□□□□□ -0.31
PDPN-202ENST00000376057 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
PDPN-202ENST00000376057 GTF2IP78347 998 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 C12orf60Q5U649 245 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 ILDR1Q86SU0 546 aaPredicted RBP13.08□□□□□ -0.32
PDPN-202ENST00000376057 ESR2Q92731 530 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 KIF3AQ9Y496 699 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 STX6O43752 255 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 SYT1P21579 422 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 MMP14P50281 582 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 RHBDL3P58872 404 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 APOBRQ0VD83 1088 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 SART3Q15020 963 aaKnown RBP13.08□□□□□ -0.32
PDPN-202ENST00000376057 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 LY9Q9HBG7 655 aa13.08□□□□□ -0.32
PDPN-202ENST00000376057 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 BAG4O95429 457 aaKnown RBP13.07□□□□□ -0.32
PDPN-202ENST00000376057 ZSCAN22P10073 491 aaPredicted RBP13.07□□□□□ -0.32
PDPN-202ENST00000376057 DPEP1P16444 411 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 DACT2Q5SW24 774 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 B4E1Z4 1266 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 BTDP43251 543 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 SH3RF3Q8TEJ3 882 aaPredicted RBP13.07□□□□□ -0.32
PDPN-202ENST00000376057 PIM2Q9P1W9 311 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 ATP6V1DQ9Y5K8 247 aa13.07□□□□□ -0.32
PDPN-202ENST00000376057 MYO3BQ8WXR4 1341 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 USP17L21D6R901 530 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 ECE2O60344 883 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 SKOR2Q2VWA4 1001 aaPredicted RBP13.06□□□□□ -0.32
PDPN-202ENST00000376057 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 NSUN7Q8NE18 718 aaKnown RBP13.06□□□□□ -0.32
PDPN-202ENST00000376057 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
PDPN-202ENST00000376057 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 SCN9AQ15858 1988 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 PDE4BQ07343 736 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 PKP1Q13835 747 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 SEC23AQ15436 765 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 ZDHHC15Q96MV8 337 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
PDPN-202ENST00000376057 ARFGEF1Q9Y6D6 1849 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 COL2A1P02458 1487 aaPredicted RBP13.05□□□□□ -0.32
PDPN-202ENST00000376057 G3V3G9 751 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 GOLGA6L22H0YM25 854 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 KDM4AO75164 1064 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 CTDNEP1O95476 244 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 ZNF287Q9HBT7 754 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 MYH1P12882 1939 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 LRRC2Q9BYS8 371 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 SERPINA10Q9UK55 444 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 LTBP3Q9NS15 1303 aa13.05□□□□□ -0.32
PDPN-202ENST00000376057 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 USP5P45974 858 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 APOA5Q6Q788 366 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 JAG2Q9Y219 1238 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 ERICH2A1L162 156 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 MINDY4BA8MYZ0 360 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 CDKL5O76039 1030 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 CHST3Q7LGC8 479 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 TMEM87AQ8NBN3 555 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 NKX2-3Q8TAU0 364 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 TEKT1Q969V4 418 aa13.04□□□□□ -0.32
PDPN-202ENST00000376057 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
PDPN-202ENST00000376057 C21orf2O43822 256 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 F13A1P00488 732 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 LARP1BQ659C4 914 aaKnown RBP13.03□□□□□ -0.32
PDPN-202ENST00000376057 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
PDPN-202ENST00000376057 MAP3K14Q99558 947 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 STK36Q9NRP7 1315 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 TTF2Q9UNY4 1162 aaKnown RBP13.03□□□□□ -0.32
PDPN-202ENST00000376057 FLT1P17948 1338 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 CALM1P0DP23 149 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 CALM2P0DP24 149 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 CALM3P0DP25 149 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 NBR1Q14596 966 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 WTAPQ15007 396 aa13.03□□□□□ -0.32
PDPN-202ENST00000376057 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms