RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SEC62Q99442 399 aaKnown RBP13.95□□□□□ -0.18
C9orf3-203ENST00000375315 AFDNP55196 1824 aaKnown RBP13.95□□□□□ -0.18
C9orf3-203ENST00000375315 APBA3O96018 575 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 NBPF5PQ86XG9 351 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-203ENST00000375315 ZNF34Q8IZ26 560 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 RABGGTAQ92696 567 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 PGBD1Q96JS3 809 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 PARD6BQ9BYG5 372 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 MED4Q9NPJ6 270 aa13.95□□□□□ -0.18
C9orf3-203ENST00000375315 CCDC151A5D8V7 595 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 PDE8AO60658 829 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 ME3Q16798 604 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 ARMCX5Q6P1M9 558 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 NECAB1Q8N987 351 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
C9orf3-203ENST00000375315 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-203ENST00000375315 SATB1Q01826 763 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 BRD3Q15059 726 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 NBPF11Q86T75 865 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 SETDB2Q96T68 719 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 FAM107BQ9H098 131 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 EPC1Q9H2F5 836 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
C9orf3-203ENST00000375315 ZNF652Q9Y2D9 606 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 ARFGEF2Q9Y6D5 1785 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 MAP2K7O14733 419 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 TDO2P48775 406 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 APOBRQ0VD83 1088 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 NMIQ13287 307 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-203ENST00000375315 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 TADA2BQ86TJ2 420 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 CNPY4Q8N129 248 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 MYH14Q7Z406 1995 aaKnown RBP13.93□□□□□ -0.18
C9orf3-203ENST00000375315 A0A087WUV0 522 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-203ENST00000375315 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
C9orf3-203ENST00000375315 USP8P40818 1118 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 ST3GAL1Q11201 340 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 TRIM28Q13263 835 aaKnown RBP13.93□□□□□ -0.18
C9orf3-203ENST00000375315 FOXR1Q6PIV2 292 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 TRIM65Q6PJ69 517 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 CEP120Q8N960 986 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 GOLGA1Q92805 767 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
C9orf3-203ENST00000375315 TTC39AQ5SRH9 613 aa13.92□□□□□ -0.18
C9orf3-203ENST00000375315 XAGE2Q96GT9 111 aa13.92□□□□□ -0.18
C9orf3-203ENST00000375315 PDE11AQ9HCR9 933 aa13.92□□□□□ -0.18
C9orf3-203ENST00000375315 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
C9orf3-203ENST00000375315 A0A0D9SFI3 127 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 ZSCAN12O43309 604 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
C9orf3-203ENST00000375315 PTH1RQ03431 593 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 SCARF1Q14162 830 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 MSL1Q68DK7 614 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 CCDC73Q6ZRK6 1079 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 RSRC2Q7L4I2 434 aaKnown RBP13.91□□□□□ -0.18
C9orf3-203ENST00000375315 HDXQ7Z353 690 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 RPAINQ86UA6 219 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 JAG2Q9Y219 1238 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 UTRNP46939 3433 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 UBR2Q8IWV8 1755 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 TCEANC2Q96MN5 208 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 TFCP2L1Q9NZI6 479 aa13.91□□□□□ -0.18
C9orf3-203ENST00000375315 RXRBP28702 533 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 TXLNAP40222 546 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 MCM6Q14566 821 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 HSP90B2PQ58FF3 399 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 MSL3Q8N5Y2 521 aaKnown RBP13.9□□□□□ -0.18
C9orf3-203ENST00000375315 RUFY2Q8WXA3 655 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 XPO4Q9C0E2 1151 aaKnown RBP13.9□□□□□ -0.18
C9orf3-203ENST00000375315 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-203ENST00000375315 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.18
C9orf3-203ENST00000375315 PRPF40BQ6NWY9 871 aaKnown RBP13.9□□□□□ -0.18
C9orf3-203ENST00000375315 IFNKQ9P0W0 207 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 ERLIN1O75477 346 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 NTSR2O95665 410 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 MNAT1P51948 309 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 EVI5LQ96CN4 794 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
C9orf3-203ENST00000375315 PPFIA4O75335 1185 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 CSF1RP07333 972 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 MAP3K9P80192 1104 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 TPCN1Q9ULQ1 816 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 PATL2C9JE40 543 aaKnown RBP13.89□□□□□ -0.19
C9orf3-203ENST00000375315 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 LRRC31Q6UY01 552 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 ZNF589Q86UQ0 364 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-203ENST00000375315 FCHSD1Q86WN1 690 aa13.89□□□□□ -0.19
C9orf3-203ENST00000375315 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
C9orf3-203ENST00000375315 HNRNPLLQ8WVV9 542 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms