RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 KIF28PB7ZC32 967 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 HLFQ16534 295 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 PLA2G12BQ9BX93 195 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 TMEM51Q9NW97 253 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 LAMA4Q16363 1823 aa12.77□□□□□ -0.36
CCDC40-203ENST00000374877 M0R2C6 588 aa12.77□□□□□ -0.36
CCDC40-203ENST00000374877 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.36
CCDC40-203ENST00000374877 DHX16O60231 1041 aaKnown RBP12.77□□□□□ -0.36
CCDC40-203ENST00000374877 SYKP43405 635 aa12.77□□□□□ -0.36
CCDC40-203ENST00000374877 FKBP4Q02790 459 aaKnown RBP eCLIP12.77□□□□□ -0.36
CCDC40-203ENST00000374877 WASHC4Q2M389 1173 aa12.77□□□□□ -0.36
CCDC40-203ENST00000374877 BRAPQ7Z569 592 aa12.77□□□□□ -0.36
CCDC40-203ENST00000374877 NLRP10Q86W26 655 aa12.77□□□□□ -0.36
CCDC40-203ENST00000374877 EPC1Q9H2F5 836 aa12.77□□□□□ -0.36
CCDC40-203ENST00000374877 BCORQ6W2J9 1755 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 PRC1O43663 620 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 TOP1P11387 765 aaKnown RBP12.77□□□□□ -0.37
CCDC40-203ENST00000374877 CYP2C19P33261 490 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.37
CCDC40-203ENST00000374877 GNL2Q13823 731 aaKnown RBP12.77□□□□□ -0.37
CCDC40-203ENST00000374877 HSP90AA4PQ58FG1 418 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 ZBTB38Q8NAP3 1195 aaPredicted RBP12.77□□□□□ -0.37
CCDC40-203ENST00000374877 TBC1D2BQ9UPU7 963 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
CCDC40-203ENST00000374877 CMA1P23946 247 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 TEX35Q5T0J7 233 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 AXDND1Q5T1B0 1012 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-203ENST00000374877 IKBKBO14920 756 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 CBFA2T2O43439 604 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 WDHD1O75717 1129 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-203ENST00000374877 EVCP57679 992 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 MYL5Q02045 173 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 TRIM65Q6PJ69 517 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 CREBRFQ8IUR6 639 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 C4BP0C0L5 1744 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 TMEM232C9JQI7 657 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 TADA3O75528 432 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 GTF2E1P29083 439 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-203ENST00000374877 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
CCDC40-203ENST00000374877 FANCGO15287 622 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 ZRANB2O95218 330 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 FAM193AP78312 1265 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 FOXO4P98177 505 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 PNOCQ13519 176 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 IMMTQ16891 758 aaKnown RBP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 PDILTQ8N807 584 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 SRRTQ9BXP5 876 aaKnown RBP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 HSD3B7Q9H2F3 369 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 TRIM37O94972 964 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 KIF23Q02241 960 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 LRRFIP1Q32MZ4 808 aaKnown RBP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 POTEAQ6S8J7 498 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 ZNF594Q96JF6 807 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-203ENST00000374877 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 ATG9AQ7Z3C6 839 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 AK7Q96M32 723 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 NUP98P52948 1817 aa12.75□□□□□ -0.37
CCDC40-203ENST00000374877 EFCAB8A8MWE9 144 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 GNG11P61952 73 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.74□□□□□ -0.37
CCDC40-203ENST00000374877 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
CCDC40-203ENST00000374877 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 A0A1B0GUL7 405 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 PLSCR1O15162 318 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 ADRA2BP18089 450 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 CCDC34Q96HJ3 373 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 FANCLQ9NW38 375 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 NARFQ9UHQ1 456 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 HPS5Q9UPZ3 1129 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 SLC39A14Q15043 492 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 VSTM4Q8IW00 320 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 PPP2R2CQ9Y2T4 447 aa12.74□□□□□ -0.37
CCDC40-203ENST00000374877 VGLL3A8MV65 326 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 CASQ1P31415 396 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 ZCCHC17Q9NP64 241 aaKnown RBP12.73□□□□□ -0.37
CCDC40-203ENST00000374877 GNPATO15228 680 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 FGAP02671 866 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 RXRAP19793 462 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
CCDC40-203ENST00000374877 CCDC158Q5M9N0 1113 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 UBN2Q6ZU65 1347 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
CCDC40-203ENST00000374877 VWA3AA6NCI4 1184 aa12.72□□□□□ -0.37
CCDC40-203ENST00000374877 TPM1P09493 284 aa12.72□□□□□ -0.37
CCDC40-203ENST00000374877 GPTP24298 496 aa12.72□□□□□ -0.37
CCDC40-203ENST00000374877 KCNQ4P56696 695 aa12.72□□□□□ -0.37
CCDC40-203ENST00000374877 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
CCDC40-203ENST00000374877 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms