RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 LCORLQ8N3X6 602 aa18.3■□□□□ 0.52
PFDN6-203ENST00000374610 RIOK1Q9BRS2 568 aaKnown RBP18.3■□□□□ 0.52
PFDN6-203ENST00000374610 TRIM34Q9BYJ4 488 aa18.3■□□□□ 0.52
PFDN6-203ENST00000374610 GBA2Q9HCG7 927 aaPredicted RBP18.3■□□□□ 0.52
PFDN6-203ENST00000374610 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
PFDN6-203ENST00000374610 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
PFDN6-203ENST00000374610 HLA-DOAP06340 250 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
PFDN6-203ENST00000374610 DCAF15Q66K64 600 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 ARMC9Q7Z3E5 817 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 OSBP2Q969R2 916 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 CSRNP1Q96S65 589 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
PFDN6-203ENST00000374610 DDX4Q9NQI0 724 aaKnown RBP18.29■□□□□ 0.52
PFDN6-203ENST00000374610 HELLSQ9NRZ9 838 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
PFDN6-203ENST00000374610 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
PFDN6-203ENST00000374610 FLT1P17948 1338 aa18.28■□□□□ 0.52
PFDN6-203ENST00000374610 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
PFDN6-203ENST00000374610 POLR3DP05423 398 aaPredicted RBP18.28■□□□□ 0.52
PFDN6-203ENST00000374610 HSPA6P17066 643 aa18.28■□□□□ 0.52
PFDN6-203ENST00000374610 GNAT2P19087 354 aa18.28■□□□□ 0.52
PFDN6-203ENST00000374610 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
PFDN6-203ENST00000374610 ZMYM1Q5SVZ6 1142 aa18.28■□□□□ 0.52
PFDN6-203ENST00000374610 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
PFDN6-203ENST00000374610 DHX36Q9H2U1 1008 aaKnown RBP18.28■□□□□ 0.52
PFDN6-203ENST00000374610 SAP30BPQ9UHR5 308 aaKnown RBP18.28■□□□□ 0.52
PFDN6-203ENST00000374610 M0R2C6 588 aa18.27■□□□□ 0.52
PFDN6-203ENST00000374610 GPAA1O43292 621 aa18.27■□□□□ 0.52
PFDN6-203ENST00000374610 IREB2P48200 963 aaKnown RBP18.27■□□□□ 0.52
PFDN6-203ENST00000374610 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
PFDN6-203ENST00000374610 MCMDC2Q4G0Z9 681 aa18.27■□□□□ 0.52
PFDN6-203ENST00000374610 CST9Q5W186 159 aa18.27■□□□□ 0.52
PFDN6-203ENST00000374610 CWC27Q6UX04 472 aaKnown RBP18.27■□□□□ 0.52
PFDN6-203ENST00000374610 ZFPM1Q8IX07 1006 aa18.27■□□□□ 0.52
PFDN6-203ENST00000374610 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
PFDN6-203ENST00000374610 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.52
PFDN6-203ENST00000374610 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
PFDN6-203ENST00000374610 CREBZFQ9NS37 354 aa18.27■□□□□ 0.52
PFDN6-203ENST00000374610 ANGEL1Q9UNK9 670 aaKnown RBP18.27■□□□□ 0.52
PFDN6-203ENST00000374610 TRPM7Q96QT4 1865 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 FKBP1BP68106 108 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 SLC4A8Q2Y0W8 1093 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 MIGA2Q7L4E1 593 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
PFDN6-203ENST00000374610 NACAP1Q9BZK3 213 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 ATP8A2Q9NTI2 1148 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 MCM9Q9NXL9 1143 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
PFDN6-203ENST00000374610 RPAP1Q9BWH6 1393 aaPredicted RBP18.26■□□□□ 0.51
PFDN6-203ENST00000374610 DDTLA6NHG4 134 aaPredicted RBP18.25■□□□□ 0.51
PFDN6-203ENST00000374610 PRKAB2O43741 272 aa18.25■□□□□ 0.51
PFDN6-203ENST00000374610 HUNKP57058 714 aa18.25■□□□□ 0.51
PFDN6-203ENST00000374610 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
PFDN6-203ENST00000374610 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
PFDN6-203ENST00000374610 A0A0D9SFI3 127 aa18.24■□□□□ 0.51
PFDN6-203ENST00000374610 TDO2P48775 406 aa18.24■□□□□ 0.51
PFDN6-203ENST00000374610 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
PFDN6-203ENST00000374610 CCDC129Q6ZRS4 1044 aa18.24■□□□□ 0.51
PFDN6-203ENST00000374610 CDAN1Q8IWY9 1227 aa18.24■□□□□ 0.51
PFDN6-203ENST00000374610 ZNF341Q9BYN7 854 aa18.24■□□□□ 0.51
PFDN6-203ENST00000374610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.24■□□□□ 0.51
PFDN6-203ENST00000374610 DCP1AQ9NPI6 582 aaPredicted RBP18.24■□□□□ 0.51
PFDN6-203ENST00000374610 PI4KBQ9UBF8 816 aa18.24■□□□□ 0.51
PFDN6-203ENST00000374610 PATL2C9JE40 543 aaKnown RBP18.23■□□□□ 0.51
PFDN6-203ENST00000374610 UBE2Q2LH0YL09 131 aa18.23■□□□□ 0.51
PFDN6-203ENST00000374610 GRM1Q13255 1194 aa18.23■□□□□ 0.51
PFDN6-203ENST00000374610 FZD1Q9UP38 647 aa18.23■□□□□ 0.51
PFDN6-203ENST00000374610 TLL2Q9Y6L7 1015 aa18.23■□□□□ 0.51
PFDN6-203ENST00000374610 DEFB115Q30KQ5 88 aa18.22■□□□□ 0.51
PFDN6-203ENST00000374610 MOB2Q70IA6 237 aa18.22■□□□□ 0.51
PFDN6-203ENST00000374610 SH3BP5LQ7L8J4 393 aa18.22■□□□□ 0.51
PFDN6-203ENST00000374610 NAPBQ9H115 298 aa18.22■□□□□ 0.51
PFDN6-203ENST00000374610 CSADQ9Y600 493 aa18.22■□□□□ 0.51
PFDN6-203ENST00000374610 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
PFDN6-203ENST00000374610 ATRNL1Q5VV63 1379 aa18.21■□□□□ 0.51
PFDN6-203ENST00000374610 USP2O75604 605 aaPredicted RBP18.21■□□□□ 0.51
PFDN6-203ENST00000374610 HTRA3P83110 453 aa18.21■□□□□ 0.51
PFDN6-203ENST00000374610 SAPCD2Q86UD0 394 aa18.21■□□□□ 0.51
PFDN6-203ENST00000374610 FOXP4Q8IVH2 680 aaPredicted RBP18.21■□□□□ 0.51
PFDN6-203ENST00000374610 ANKRD13AQ8IZ07 590 aa18.21■□□□□ 0.51
PFDN6-203ENST00000374610 WRNIP1Q96S55 665 aa18.21■□□□□ 0.51
PFDN6-203ENST00000374610 HERC5Q9UII4 1024 aaKnown RBP18.21■□□□□ 0.51
PFDN6-203ENST00000374610 PAPPA2Q9BXP8 1791 aa18.21■□□□□ 0.51
PFDN6-203ENST00000374610 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
PFDN6-203ENST00000374610 MINDY4BA8MYZ0 360 aa18.2■□□□□ 0.5
PFDN6-203ENST00000374610 CHMLP26374 656 aa18.2■□□□□ 0.5
PFDN6-203ENST00000374610 ZNF157P51786 506 aaPredicted RBP18.2■□□□□ 0.5
PFDN6-203ENST00000374610 MAP3K9P80192 1104 aa18.2■□□□□ 0.5
PFDN6-203ENST00000374610 GIMAP6Q6P9H5 292 aa18.2■□□□□ 0.5
PFDN6-203ENST00000374610 SLC10A4Q96EP9 437 aa18.2■□□□□ 0.5
PFDN6-203ENST00000374610 ARPP21Q9UBL0 812 aaPredicted RBP18.2■□□□□ 0.5
PFDN6-203ENST00000374610 FOCADQ5VW36 1801 aa18.2■□□□□ 0.5
PFDN6-203ENST00000374610 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
PFDN6-203ENST00000374610 CDK5RAP2Q96SN8 1893 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms