RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 KIF14Q15058 1648 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 TAF7Q15545 349 aaPredicted RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 NSD2O96028 1365 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 VSNL1P62760 191 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 WHAMMQ8TF30 809 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
CD28-202ENST00000374481 KAT14Q9H8E8 782 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 ENC1O14682 589 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 NR1D1P20393 614 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 TBC1D1Q86TI0 1168 aaPredicted RBP11.46□□□□□ -0.57
CD28-202ENST00000374481 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.57
CD28-202ENST00000374481 HAUS4Q9H6D7 363 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 KCNK9Q9NPC2 374 aa11.46□□□□□ -0.57
CD28-202ENST00000374481 CHCHD3Q9NX63 227 aaKnown RBP11.46□□□□□ -0.57
CD28-202ENST00000374481 A0A1W2PRG0 241 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 SLC27A2O14975 620 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 ALDH3A1P30838 453 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 ARMC9Q7Z3E5 817 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 SIRT1Q96EB6 747 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 CEP63Q96MT8 703 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 WDR24Q96S15 920 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 LLPHQ9BRT6 129 aaKnown RBP11.46□□□□□ -0.58
CD28-202ENST00000374481 MYO1AQ9UBC5 1043 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.58
CD28-202ENST00000374481 H3BQF6 201 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 IKBKBO14920 756 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 EPHB4P54760 987 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 FKBP4Q02790 459 aaKnown RBP eCLIP11.45□□□□□ -0.58
CD28-202ENST00000374481 C1orf141Q5JVX7 400 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 NCAPH2Q6IBW4 605 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 CCDC174Q6PII3 467 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 FOXR1Q6PIV2 292 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 ABTB1Q969K4 478 aaPredicted RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 PHAXQ9H814 394 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 ETAA1Q9NY74 926 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 SOS1Q07889 1333 aaPredicted RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 GRIN2AQ12879 1464 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 MSH6P52701 1360 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 CHRM1P11229 460 aaPredicted RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 CTNNA1P35221 906 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 IRAK1P51617 712 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 RNASE9P60153 205 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 DYNC1I2Q13409 638 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 CCDC57Q2TAC2 916 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 ARMCX5Q6P1M9 558 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 VPS36Q86VN1 386 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 VSTM4Q8IW00 320 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.45□□□□□ -0.58
CD28-202ENST00000374481 KLHL29Q96CT2 875 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 SEPT11Q9NVA2 429 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 SCOCQ9UIL1 159 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 FAM135BQ49AJ0 1406 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 AP5Z1O43299 807 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 ZBTB16Q05516 673 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 KIRREL3Q8IZU9 778 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 IQUBQ8NA54 791 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 ARHGEF2Q92974 986 aaKnown RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 ATP1A3P13637 1013 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 KCNJ6P48051 423 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 FAM43BQ6ZT52 329 aaPredicted RBP11.45□□□□□ -0.58
CD28-202ENST00000374481 HOOK3Q86VS8 718 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 TBC1D22AQ8WUA7 517 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 AKAP2Q9Y2D5 859 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 KIAA0556O60303 1618 aa11.45□□□□□ -0.58
CD28-202ENST00000374481 EXOC5O00471 708 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 SKAP2O75563 359 aaPredicted RBP11.44□□□□□ -0.58
CD28-202ENST00000374481 NDUFA8P51970 172 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 CUL3Q13618 768 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 ALS2CLQ60I27 953 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 DHX32Q7L7V1 743 aaKnown RBP11.44□□□□□ -0.58
CD28-202ENST00000374481 RAB3IPQ96QF0 476 aaPredicted RBP11.44□□□□□ -0.58
CD28-202ENST00000374481 PCDHA7Q9UN72 937 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 EIF4E1BA6NMX2 242 aaKnown RBP11.44□□□□□ -0.58
CD28-202ENST00000374481 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.58
CD28-202ENST00000374481 PNOCQ13519 176 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 IFI16Q16666 785 aaKnown RBP11.44□□□□□ -0.58
CD28-202ENST00000374481 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
CD28-202ENST00000374481 COG1Q8WTW3 980 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 FAM210AQ96ND0 272 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 ABCC2Q92887 1545 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 TOM1O60784 492 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 PSEN1P49768 467 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 MICU3Q86XE3 530 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 SIRT2Q8IXJ6 389 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 RMND1Q9NWS8 449 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 PARP3Q9Y6F1 533 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 ABCC4O15439 1325 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 AOX1Q06278 1338 aa11.44□□□□□ -0.58
CD28-202ENST00000374481 GOLGA8AA7E2F4 631 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 CEP104O60308 925 aa11.43□□□□□ -0.58
CD28-202ENST00000374481 SLC8A3P57103 927 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms