RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 TTC14Q96N46 770 aa11.49□□□□□ -0.57
PTPN20-202ENST00000374339 DCP1AQ9NPI6 582 aaPredicted RBP11.49□□□□□ -0.57
PTPN20-202ENST00000374339 KCNQ5Q9NR82 932 aa11.49□□□□□ -0.57
PTPN20-202ENST00000374339 ANAPC4Q9UJX5 808 aa11.49□□□□□ -0.57
PTPN20-202ENST00000374339 SERPINA10Q9UK55 444 aa11.49□□□□□ -0.57
PTPN20-202ENST00000374339 BAZ2AQ9UIF9 1905 aaKnown RBP11.48□□□□□ -0.57
PTPN20-202ENST00000374339 COL4A5P29400 1685 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
PTPN20-202ENST00000374339 SLC3A2P08195 630 aaKnown RBP11.48□□□□□ -0.57
PTPN20-202ENST00000374339 MCM5P33992 734 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 NT5C2P49902 561 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 TNIP1Q15025 636 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 AKNAD1Q5T1N1 836 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
PTPN20-202ENST00000374339 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 DHX32Q7L7V1 743 aaKnown RBP11.48□□□□□ -0.57
PTPN20-202ENST00000374339 KIAA0825Q8IV33 1275 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 TEX11Q8IYF3 940 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 OGFOD1Q8N543 542 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 SH3RF3Q8TEJ3 882 aaPredicted RBP11.48□□□□□ -0.57
PTPN20-202ENST00000374339 ZDHHC15Q96MV8 337 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 SYT17Q9BSW7 474 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 KRT23Q9C075 422 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 HDAC9Q9UKV0 1011 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 LIMCH1Q9UPQ0 1083 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 TAF6LQ9Y6J9 622 aa11.48□□□□□ -0.57
PTPN20-202ENST00000374339 CRKP46108 304 aa11.47□□□□□ -0.57
PTPN20-202ENST00000374339 SCNN1DP51172 638 aa11.47□□□□□ -0.57
PTPN20-202ENST00000374339 FGD1P98174 961 aa11.47□□□□□ -0.57
PTPN20-202ENST00000374339 PPARAQ07869 468 aa11.47□□□□□ -0.57
PTPN20-202ENST00000374339 STOX1Q6ZVD7 989 aa11.47□□□□□ -0.57
PTPN20-202ENST00000374339 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
PTPN20-202ENST00000374339 ZSCAN31Q96LW9 406 aaPredicted RBP11.47□□□□□ -0.57
PTPN20-202ENST00000374339 MXD3Q9BW11 206 aa11.47□□□□□ -0.57
PTPN20-202ENST00000374339 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
PTPN20-202ENST00000374339 DDX60LQ5H9U9 1706 aaKnown RBP11.47□□□□□ -0.57
PTPN20-202ENST00000374339 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 USP17L12C9JPN9 530 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 USP17L21D6R901 530 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 PSMD14O00487 310 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 RAD17O75943 681 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 CPA1P15085 419 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
PTPN20-202ENST00000374339 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 RBM5P52756 815 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTPN20-202ENST00000374339 AK2P54819 239 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 RHBDL3P58872 404 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 CTR9Q6PD62 1173 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 TBC1D10CQ8IV04 446 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 FBXL16Q8N461 479 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 TGFBRAP1Q8WUH2 860 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 NBPF3Q9H094 633 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
PTPN20-202ENST00000374339 MCM9Q9NXL9 1143 aa11.46□□□□□ -0.57
PTPN20-202ENST00000374339 MKRN1Q9UHC7 482 aaKnown RBP11.46□□□□□ -0.57
PTPN20-202ENST00000374339 MYH1P12882 1939 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
PTPN20-202ENST00000374339 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 CXCL9Q07325 125 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 PDE4BQ07343 736 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 ARHGAP27Q6ZUM4 889 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 MB21D2Q8IYB1 491 aaPredicted RBP11.45□□□□□ -0.58
PTPN20-202ENST00000374339 TMX3Q96JJ7 454 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 GMLQ99445 158 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 MTA3Q9BTC8 594 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 ZNF287Q9HBT7 754 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 USP40Q9NVE5 1235 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 FLT1P17948 1338 aa11.45□□□□□ -0.58
PTPN20-202ENST00000374339 ROBO3Q96MS0 1386 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 FZD9O00144 591 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 POLR3DP05423 398 aaPredicted RBP11.44□□□□□ -0.58
PTPN20-202ENST00000374339 USP17L8P0C7I0 530 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 LMNB1P20700 586 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 EXOSC10Q01780 885 aaKnown RBP11.44□□□□□ -0.58
PTPN20-202ENST00000374339 RASSF7Q02833 373 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 SART3Q15020 963 aaKnown RBP11.44□□□□□ -0.58
PTPN20-202ENST00000374339 C12orf60Q5U649 245 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
PTPN20-202ENST00000374339 ESR2Q92731 530 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 CHMP4CQ96CF2 233 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 TMEM87BQ96K49 555 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 NEDD4P46934 1319 aa11.44□□□□□ -0.58
PTPN20-202ENST00000374339 PRC1O43663 620 aa11.43□□□□□ -0.58
PTPN20-202ENST00000374339 FGRP09769 529 aa11.43□□□□□ -0.58
PTPN20-202ENST00000374339 TOB2Q14106 344 aaPredicted RBP11.43□□□□□ -0.58
PTPN20-202ENST00000374339 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
PTPN20-202ENST00000374339 Q6ZUG5 572 aa11.43□□□□□ -0.58
PTPN20-202ENST00000374339 NOL8Q76FK4 1167 aaKnown RBP11.43□□□□□ -0.58
PTPN20-202ENST00000374339 MAPKAPK5Q8IW41 473 aa11.43□□□□□ -0.58
PTPN20-202ENST00000374339 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
PTPN20-202ENST00000374339 TMOD2Q9NZR1 351 aa11.43□□□□□ -0.58
PTPN20-202ENST00000374339 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
PTPN20-202ENST00000374339 SBF1O95248 1867 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms