RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 DBNLQ9UJU6 430 aaKnown RBP26.64■■□□□ 1.86
CCDC28B-201ENST00000373602 MAP4K4O95819 1239 aaPredicted RBP26.63■■□□□ 1.85
CCDC28B-201ENST00000373602 CETPP11597 493 aa26.63■■□□□ 1.85
CCDC28B-201ENST00000373602 NOL9Q5SY16 702 aaKnown RBP26.63■■□□□ 1.85
CCDC28B-201ENST00000373602 EAF2Q96CJ1 260 aaPredicted RBP26.63■■□□□ 1.85
CCDC28B-201ENST00000373602 NPM3O75607 178 aaKnown RBP26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 MAP3K10Q02779 954 aa26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 SNAPC2Q13487 334 aa26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 PICALMQ13492 652 aa26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 FAM43AQ8N2R8 423 aa26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 DDX19BQ9UMR2 479 aa26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 HPS5Q9UPZ3 1129 aa26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 COG6Q9Y2V7 657 aa26.62■■□□□ 1.85
CCDC28B-201ENST00000373602 DOCK2Q92608 1830 aa26.61■■□□□ 1.85
CCDC28B-201ENST00000373602 DDTLA6NHG4 134 aaPredicted RBP26.61■■□□□ 1.85
CCDC28B-201ENST00000373602 ERC1Q8IUD2 1116 aa26.61■■□□□ 1.85
CCDC28B-201ENST00000373602 ZSCAN29Q8IWY8 852 aaPredicted RBP26.61■■□□□ 1.85
CCDC28B-201ENST00000373602 CCDC8Q9H0W5 538 aaPredicted RBP26.61■■□□□ 1.85
CCDC28B-201ENST00000373602 TLR7Q9NYK1 1049 aaKnown RBP26.61■■□□□ 1.85
CCDC28B-201ENST00000373602 EXOC6BQ9Y2D4 811 aa26.61■■□□□ 1.85
CCDC28B-201ENST00000373602 PHF20L1A8MW92 1017 aa26.6■■□□□ 1.85
CCDC28B-201ENST00000373602 CYP2E1P05181 493 aaPredicted RBP26.6■■□□□ 1.85
CCDC28B-201ENST00000373602 TAF1CQ15572 869 aaPredicted RBP26.6■■□□□ 1.85
CCDC28B-201ENST00000373602 FBXO46Q6PJ61 603 aaPredicted RBP26.6■■□□□ 1.85
CCDC28B-201ENST00000373602 ZFYVE28Q9HCC9 887 aa26.6■■□□□ 1.85
CCDC28B-201ENST00000373602 ZCCHC17Q9NP64 241 aaKnown RBP26.6■■□□□ 1.85
CCDC28B-201ENST00000373602 ZBTB40Q9NUA8 1239 aa26.6■■□□□ 1.85
CCDC28B-201ENST00000373602 IGSF3O75054 1194 aa26.59■■□□□ 1.85
CCDC28B-201ENST00000373602 RPAP2Q8IXW5 612 aaPredicted RBP26.59■■□□□ 1.85
CCDC28B-201ENST00000373602 ERO1AQ96HE7 468 aa26.59■■□□□ 1.85
CCDC28B-201ENST00000373602 KCNH4Q9UQ05 1017 aa26.59■■□□□ 1.85
CCDC28B-201ENST00000373602 BTBD19C9JJ37 291 aa26.58■■□□□ 1.85
CCDC28B-201ENST00000373602 ZAP70P43403 619 aa26.58■■□□□ 1.85
CCDC28B-201ENST00000373602 SP3Q02447 781 aa26.58■■□□□ 1.85
CCDC28B-201ENST00000373602 HSP90AB4PQ58FF6 505 aa26.58■■□□□ 1.85
CCDC28B-201ENST00000373602 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.58■■□□□ 1.85
CCDC28B-201ENST00000373602 NAA16Q6N069 864 aaPredicted RBP26.57■■□□□ 1.84
CCDC28B-201ENST00000373602 OTOP1Q7RTM1 612 aa26.57■■□□□ 1.84
CCDC28B-201ENST00000373602 TRIM17Q9Y577 477 aa26.57■■□□□ 1.84
CCDC28B-201ENST00000373602 SCYL3Q8IZE3 742 aa26.56■■□□□ 1.84
CCDC28B-201ENST00000373602 CD99L2Q8TCZ2 262 aa26.56■■□□□ 1.84
CCDC28B-201ENST00000373602 CHMP4BQ9H444 224 aaKnown RBP26.56■■□□□ 1.84
CCDC28B-201ENST00000373602 MAST2Q6P0Q8 1798 aa26.56■■□□□ 1.84
CCDC28B-201ENST00000373602 COL2A1P02458 1487 aaPredicted RBP26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 TBC1D12O60347 775 aa26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 SLURP2P0DP57 97 aa26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 AACSQ86V21 672 aa26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 TEX11Q8IYF3 940 aa26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 RHPN1Q8TCX5 695 aa26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 NOL10Q9BSC4 688 aaKnown RBP26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 OSBPL5Q9H0X9 879 aaPredicted RBP26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 PIH1D3Q9NQM4 214 aaKnown RBP26.55■■□□□ 1.84
CCDC28B-201ENST00000373602 HMMRO75330 724 aa26.54■■□□□ 1.84
CCDC28B-201ENST00000373602 BAG3O95817 575 aa26.54■■□□□ 1.84
CCDC28B-201ENST00000373602 PPP4CP60510 307 aa26.54■■□□□ 1.84
CCDC28B-201ENST00000373602 MLLT1Q03111 559 aaPredicted RBP26.54■■□□□ 1.84
CCDC28B-201ENST00000373602 SIRT2Q8IXJ6 389 aa26.54■■□□□ 1.84
CCDC28B-201ENST00000373602 SH3RF3Q8TEJ3 882 aaPredicted RBP26.54■■□□□ 1.84
CCDC28B-201ENST00000373602 CXCL11O14625 94 aa26.53■■□□□ 1.84
CCDC28B-201ENST00000373602 CTNND1O60716 968 aaKnown RBP26.53■■□□□ 1.84
CCDC28B-201ENST00000373602 ANKRD23Q86SG2 305 aa26.53■■□□□ 1.84
CCDC28B-201ENST00000373602 PICK1Q9NRD5 415 aa26.53■■□□□ 1.84
CCDC28B-201ENST00000373602 AATFQ9NY61 560 aaKnown RBP eCLIP26.53■■□□□ 1.84
CCDC28B-201ENST00000373602 TLR2O60603 784 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 PLCG2P16885 1265 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 PTPRAP18433 802 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 SOX10P56693 466 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 CAP1Q01518 475 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 MOGSQ13724 837 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 PDE3AQ14432 1141 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 ADGRA1Q86SQ6 560 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 EFCC1Q9HA90 598 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 IL1RAPL2Q9NP60 686 aa26.52■■□□□ 1.84
CCDC28B-201ENST00000373602 MYO5AQ9Y4I1 1855 aaKnown RBP26.51■■□□□ 1.83
CCDC28B-201ENST00000373602 ZHX2Q9Y6X8 837 aa26.51■■□□□ 1.83
CCDC28B-201ENST00000373602 C20orf194Q5TEA3 1177 aa26.5■■□□□ 1.83
CCDC28B-201ENST00000373602 KIF1BPQ96EK5 621 aa26.5■■□□□ 1.83
CCDC28B-201ENST00000373602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.5■■□□□ 1.83
CCDC28B-201ENST00000373602 PTPN22Q9Y2R2 807 aa26.5■■□□□ 1.83
CCDC28B-201ENST00000373602 AFG3L2Q9Y4W6 797 aa26.49■■□□□ 1.83
CCDC28B-201ENST00000373602 PDHXO00330 501 aa26.48■■□□□ 1.83
CCDC28B-201ENST00000373602 IDH1O75874 414 aaKnown RBP26.48■■□□□ 1.83
CCDC28B-201ENST00000373602 CLASRPQ8N2M8 674 aaKnown RBP26.48■■□□□ 1.83
CCDC28B-201ENST00000373602 TGFBRAP1Q8WUH2 860 aa26.48■■□□□ 1.83
CCDC28B-201ENST00000373602 ANTXR1Q9H6X2 564 aa26.48■■□□□ 1.83
CCDC28B-201ENST00000373602 NDUFB9Q9Y6M9 179 aa26.48■■□□□ 1.83
CCDC28B-201ENST00000373602 DOCK1Q14185 1865 aa26.48■■□□□ 1.83
CCDC28B-201ENST00000373602 FAM196BA6NMK8 535 aa26.47■■□□□ 1.83
CCDC28B-201ENST00000373602 RAB11FIP3O75154 756 aa26.47■■□□□ 1.83
CCDC28B-201ENST00000373602 CYP7A1P22680 504 aa26.47■■□□□ 1.83
CCDC28B-201ENST00000373602 ARHGEF6Q15052 776 aa26.47■■□□□ 1.83
CCDC28B-201ENST00000373602 DHX36Q9H2U1 1008 aaKnown RBP26.47■■□□□ 1.83
CCDC28B-201ENST00000373602 A0A0G2JLL6 359 aaPredicted RBP26.46■■□□□ 1.83
CCDC28B-201ENST00000373602 APBB1O00213 710 aa26.46■■□□□ 1.83
CCDC28B-201ENST00000373602 GPAT2Q6NUI2 795 aa26.46■■□□□ 1.83
CCDC28B-201ENST00000373602 C17orf99Q6UX52 265 aa26.46■■□□□ 1.83
CCDC28B-201ENST00000373602 PRRT2Q7Z6L0 340 aaPredicted RBP26.46■■□□□ 1.83
CCDC28B-201ENST00000373602 PI4KBQ9UBF8 816 aa26.46■■□□□ 1.83
CCDC28B-201ENST00000373602 HERC5Q9UII4 1024 aaKnown RBP26.46■■□□□ 1.83
CCDC28B-201ENST00000373602 FLT1P17948 1338 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms