RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SDSP20132 328 aa22.33■■□□□ 1.17
CDX4-201ENST00000373514 FKBP1CQ5VVH2 108 aa22.33■■□□□ 1.17
CDX4-201ENST00000373514 FAM83AQ86UY5 434 aa22.33■■□□□ 1.17
CDX4-201ENST00000373514 APPBP2Q92624 585 aa22.33■■□□□ 1.17
CDX4-201ENST00000373514 ATAD5Q96QE3 1844 aa22.33■■□□□ 1.17
CDX4-201ENST00000373514 ZFYP08048 801 aaPredicted RBP22.32■■□□□ 1.16
CDX4-201ENST00000373514 PLCG2P16885 1265 aa22.32■■□□□ 1.16
CDX4-201ENST00000373514 HTRA3P83110 453 aa22.32■■□□□ 1.16
CDX4-201ENST00000373514 SH3BP5LQ7L8J4 393 aa22.32■■□□□ 1.16
CDX4-201ENST00000373514 FAM151AQ8WW52 585 aa22.32■■□□□ 1.16
CDX4-201ENST00000373514 A0A0D9SFI3 127 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 DDTLA6NHG4 134 aaPredicted RBP22.31■■□□□ 1.16
CDX4-201ENST00000373514 PRKAB2O43741 272 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 APLP1P51693 650 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 PRKG1Q13976 671 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 SLC4A8Q2Y0W8 1093 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 ZMYM1Q5SVZ6 1142 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 MOB2Q70IA6 237 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 SDR42E1Q8WUS8 393 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 FAM227BQ96M60 508 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 OSBPL5Q9H0X9 879 aaPredicted RBP22.31■■□□□ 1.16
CDX4-201ENST00000373514 ENTPD3O75355 529 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 SLURP2P0DP57 97 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 CCDC129Q6ZRS4 1044 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 AIDAQ96BJ3 306 aa22.31■■□□□ 1.16
CDX4-201ENST00000373514 COL2A1P02458 1487 aaPredicted RBP22.3■■□□□ 1.16
CDX4-201ENST00000373514 USP5P45974 858 aa22.3■■□□□ 1.16
CDX4-201ENST00000373514 NMIQ13287 307 aaPredicted RBP22.3■■□□□ 1.16
CDX4-201ENST00000373514 SAP30BPQ9UHR5 308 aaKnown RBP22.3■■□□□ 1.16
CDX4-201ENST00000373514 GPAA1O43292 621 aa22.29■■□□□ 1.16
CDX4-201ENST00000373514 LRRFIP1Q32MZ4 808 aaKnown RBP22.29■■□□□ 1.16
CDX4-201ENST00000373514 CRNKL1Q9BZJ0 848 aaKnown RBP22.29■■□□□ 1.16
CDX4-201ENST00000373514 GBA2Q9HCG7 927 aaPredicted RBP22.29■■□□□ 1.16
CDX4-201ENST00000373514 ATRNL1Q5VV63 1379 aa22.29■■□□□ 1.16
CDX4-201ENST00000373514 DOCK1Q14185 1865 aa22.29■■□□□ 1.16
CDX4-201ENST00000373514 TMEM88BA6NKF7 163 aa22.28■■□□□ 1.16
CDX4-201ENST00000373514 HSPA6P17066 643 aa22.28■■□□□ 1.16
CDX4-201ENST00000373514 CERS3Q8IU89 383 aa22.27■■□□□ 1.16
CDX4-201ENST00000373514 ZSCAN29Q8IWY8 852 aaPredicted RBP22.27■■□□□ 1.16
CDX4-201ENST00000373514 CSRNP1Q96S65 589 aa22.27■■□□□ 1.16
CDX4-201ENST00000373514 STRBPQ96SI9 672 aaKnown RBP22.27■■□□□ 1.16
CDX4-201ENST00000373514 SLC4A4Q9Y6R1 1079 aa22.27■■□□□ 1.16
CDX4-201ENST00000373514 NPM3O75607 178 aaKnown RBP22.26■■□□□ 1.15
CDX4-201ENST00000373514 NF2P35240 595 aa22.26■■□□□ 1.15
CDX4-201ENST00000373514 EVX2Q03828 476 aa22.26■■□□□ 1.15
CDX4-201ENST00000373514 PALD1Q9ULE6 856 aa22.26■■□□□ 1.15
CDX4-201ENST00000373514 LAMA4Q16363 1823 aa22.26■■□□□ 1.15
CDX4-201ENST00000373514 TTLL12Q14166 644 aaPredicted RBP22.26■■□□□ 1.15
CDX4-201ENST00000373514 MIGA2Q7L4E1 593 aa22.26■■□□□ 1.15
CDX4-201ENST00000373514 ZNF589Q86UQ0 364 aaPredicted RBP22.26■■□□□ 1.15
CDX4-201ENST00000373514 IL25Q9H293 177 aa22.26■■□□□ 1.15
CDX4-201ENST00000373514 DCP1AQ9NPI6 582 aaPredicted RBP22.26■■□□□ 1.15
CDX4-201ENST00000373514 MKRN1Q9UHC7 482 aaKnown RBP22.26■■□□□ 1.15
CDX4-201ENST00000373514 FAM196BA6NMK8 535 aa22.25■■□□□ 1.15
CDX4-201ENST00000373514 SUPT20HL1Q3ZLR7 823 aa22.25■■□□□ 1.15
CDX4-201ENST00000373514 CWC27Q6UX04 472 aaKnown RBP22.25■■□□□ 1.15
CDX4-201ENST00000373514 CREBZFQ9NS37 354 aa22.25■■□□□ 1.15
CDX4-201ENST00000373514 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
CDX4-201ENST00000373514 ABT1Q9ULW3 272 aaKnown RBP22.25■■□□□ 1.15
CDX4-201ENST00000373514 ANGEL1Q9UNK9 670 aaKnown RBP22.25■■□□□ 1.15
CDX4-201ENST00000373514 BMP2KLQ5H9B9 411 aa22.24■■□□□ 1.15
CDX4-201ENST00000373514 EPB41L4AQ9HCS5 686 aaPredicted RBP22.24■■□□□ 1.15
CDX4-201ENST00000373514 HELLSQ9NRZ9 838 aa22.24■■□□□ 1.15
CDX4-201ENST00000373514 TLL2Q9Y6L7 1015 aa22.24■■□□□ 1.15
CDX4-201ENST00000373514 UBE2Q2LH0YL09 131 aa22.23■■□□□ 1.15
CDX4-201ENST00000373514 FOXP2O15409 715 aa22.23■■□□□ 1.15
CDX4-201ENST00000373514 C2orf69Q8N8R5 385 aa22.23■■□□□ 1.15
CDX4-201ENST00000373514 PHIPQ8WWQ0 1821 aa22.23■■□□□ 1.15
CDX4-201ENST00000373514 GSG1L2A8MUP6 293 aa22.22■■□□□ 1.15
CDX4-201ENST00000373514 SMIM22K7EJ46 135 aa22.22■■□□□ 1.15
CDX4-201ENST00000373514 USP2O75604 605 aaPredicted RBP22.22■■□□□ 1.15
CDX4-201ENST00000373514 CYP2D6P10635 497 aa22.22■■□□□ 1.15
CDX4-201ENST00000373514 VPS53Q5VIR6 699 aa22.22■■□□□ 1.15
CDX4-201ENST00000373514 SAPCD2Q86UD0 394 aa22.22■■□□□ 1.15
CDX4-201ENST00000373514 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.22■■□□□ 1.15
CDX4-201ENST00000373514 CYP2D7A0A087X1C5 515 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 HUNKP57058 714 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 MCMDC2Q4G0Z9 681 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 MCM9Q9NXL9 1143 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 CHMLP26374 656 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 TICAM2Q86XR7 235 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 DNAJC18Q9H819 358 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 ATP8A2Q9NTI2 1148 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 THSD7BQ9C0I4 1608 aa22.21■■□□□ 1.15
CDX4-201ENST00000373514 CCDC171Q6TFL3 1326 aa22.2■■□□□ 1.15
CDX4-201ENST00000373514 HIP1O00291 1037 aa22.2■■□□□ 1.14
CDX4-201ENST00000373514 PPP1R12BO60237 982 aaPredicted RBP22.2■■□□□ 1.14
CDX4-201ENST00000373514 ARMC9Q7Z3E5 817 aa22.2■■□□□ 1.14
CDX4-201ENST00000373514 CLMNQ96JQ2 1002 aa22.2■■□□□ 1.14
CDX4-201ENST00000373514 DHX36Q9H2U1 1008 aaKnown RBP22.2■■□□□ 1.14
CDX4-201ENST00000373514 PLCD1P51178 756 aa22.19■■□□□ 1.14
CDX4-201ENST00000373514 FKBP1BP68106 108 aa22.19■■□□□ 1.14
CDX4-201ENST00000373514 MAP3K11Q16584 847 aa22.19■■□□□ 1.14
CDX4-201ENST00000373514 DCAF15Q66K64 600 aa22.19■■□□□ 1.14
CDX4-201ENST00000373514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDX4-201ENST00000373514 WRNIP1Q96S55 665 aa22.19■■□□□ 1.14
CDX4-201ENST00000373514 ZNF341Q9BYN7 854 aa22.19■■□□□ 1.14
CDX4-201ENST00000373514 TSHZ2Q9NRE2 1034 aa22.19■■□□□ 1.14
CDX4-201ENST00000373514 APPP05067 770 aa22.18■■□□□ 1.14
CDX4-201ENST00000373514 POLR3DP05423 398 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms