RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ZSCAN26Q16670 478 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 FCHSD1Q86WN1 690 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 MRPL44Q9H9J2 332 aaKnown RBP15.69■□□□□ 0.1
USP49-201ENST00000373006 CEP126Q9P2H0 1117 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 H3BQF6 201 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 PPP6R2O75170 966 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 APPP05067 770 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 GPS2Q13227 327 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 MCM6Q14566 821 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 LONRF2Q1L5Z9 754 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 SPECC1LQ69YQ0 1117 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 INCENPQ9NQS7 918 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 SAMSN1Q9NSI8 373 aaKnown RBP15.69■□□□□ 0.1
USP49-201ENST00000373006 LCMT1Q9UIC8 334 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 ADAM21Q9UKJ8 722 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 GPAA1O43292 621 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 ATP8B1O43520 1251 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 STX10O60499 249 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 TATP17735 454 aaPredicted RBP15.68■□□□□ 0.1
USP49-201ENST00000373006 TBX2Q13207 712 aaPredicted RBP15.68■□□□□ 0.1
USP49-201ENST00000373006 CYB5R4Q7L1T6 521 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 SOWAHDA6NJG2 315 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 TRDNQ13061 729 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 GOLGA1Q92805 767 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 XAGE2Q96GT9 111 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 GPR108Q9NPR9 543 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 CWC25Q9NXE8 425 aaPredicted RBP15.68■□□□□ 0.1
USP49-201ENST00000373006 ARHGAP23Q9P227 1491 aa15.68■□□□□ 0.1
USP49-201ENST00000373006 NBPF26B4DH59 902 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 TFRCP02786 760 aaKnown RBP15.67■□□□□ 0.1
USP49-201ENST00000373006 ATP2B1P20020 1258 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 NBPF14Q5TI25 921 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 NBPF10Q6P3W6 841 aaKnown RBP15.67■□□□□ 0.1
USP49-201ENST00000373006 NBPF15Q8N660 670 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 RABGGTAQ92696 567 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 MAN1B1Q9UKM7 699 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 ANGEL1Q9UNK9 670 aaKnown RBP15.67■□□□□ 0.1
USP49-201ENST00000373006 C5P01031 1676 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 POLR2DO15514 142 aaKnown RBP15.67■□□□□ 0.1
USP49-201ENST00000373006 GTF2A1P52655 376 aaPredicted RBP15.67■□□□□ 0.1
USP49-201ENST00000373006 CCDC82Q8N4S0 544 aa15.67■□□□□ 0.1
USP49-201ENST00000373006 B4E1Z4 1266 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 TXLNAP40222 546 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 WWC2Q6AWC2 1192 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 NFXL1Q6ZNB6 911 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 SUGCTQ9HAC7 445 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 CABP4P57796 275 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 TRIM29Q14134 588 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 TBC1D10CQ8IV04 446 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 IFNL2Q8IZJ0 200 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 MED15Q96RN5 788 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.66■□□□□ 0.1
USP49-201ENST00000373006 SERTAD1Q9UHV2 236 aa15.66■□□□□ 0.1
USP49-201ENST00000373006 ZMYM6O95789 1325 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 USP54Q70EL1 1684 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 GOLGA6L9A6NEM1 432 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 CUTAO60888 179 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 A1BGP04217 495 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 IARSP41252 1262 aaKnown RBP15.65■□□□□ 0.1
USP49-201ENST00000373006 MDM2Q00987 491 aaPredicted RBP15.65■□□□□ 0.1
USP49-201ENST00000373006 TEX2Q8IWB9 1127 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 APPBP2Q92624 585 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 RASSF4Q9H2L5 321 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 PDE11AQ9HCR9 933 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 BTBD18B2RXH4 712 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 TEX33O43247 280 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 CHMP4BP1P59074 171 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 POSTNQ15063 836 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 APOA5Q6Q788 366 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 DRC1Q96MC2 740 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 VPS18Q9P253 973 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 CYP27B1O15528 508 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 RANBP6O60518 1105 aaKnown RBP15.65■□□□□ 0.1
USP49-201ENST00000373006 KRI1Q8N9T8 703 aaKnown RBP15.65■□□□□ 0.1
USP49-201ENST00000373006 SLC26A6Q9BXS9 759 aa15.65■□□□□ 0.1
USP49-201ENST00000373006 TEX13AQ9BXU3 409 aaPredicted RBP15.65■□□□□ 0.1
USP49-201ENST00000373006 KLHL10Q6JEL2 608 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 RGS22Q8NE09 1264 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 SEC31BQ9NQW1 1179 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 RAI14Q9P0K7 980 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 KCNJ14Q9UNX9 436 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 N4BP1O75113 896 aaKnown RBP15.64■□□□□ 0.09
USP49-201ENST00000373006 ZNF18P17022 549 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 STX17P56962 302 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 SART3Q15020 963 aaKnown RBP15.64■□□□□ 0.09
USP49-201ENST00000373006 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 CPLX2Q6PUV4 134 aaKnown RBP15.64■□□□□ 0.09
USP49-201ENST00000373006 EP400NLQ6ZTU2 488 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 AK7Q96M32 723 aa15.64■□□□□ 0.09
USP49-201ENST00000373006 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.64■□□□□ 0.09
USP49-201ENST00000373006 ZFYP08048 801 aaPredicted RBP15.63■□□□□ 0.09
USP49-201ENST00000373006 CCDC175P0C221 793 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 SLC9C2Q5TAH2 1124 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 RAD9BQ6WBX8 426 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 USP49Q70CQ1 688 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 AFDNP55196 1824 aaKnown RBP15.63■□□□□ 0.09
USP49-201ENST00000373006 FAM237AA0A1B0GTK4 181 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 ZBTB43O43298 467 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms