RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 FOXD4L3Q6VB84 417 aaPredicted RBP15.25■□□□□ 0.03
LDB3-203ENST00000372056 RALYLQ86SE5 291 aaKnown RBP15.25■□□□□ 0.03
LDB3-203ENST00000372056 TBC1D10CQ8IV04 446 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 GPT2Q8TD30 523 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 ZNF274Q96GC6 653 aaPredicted RBP15.25■□□□□ 0.03
LDB3-203ENST00000372056 LLPHQ9BRT6 129 aaKnown RBP15.25■□□□□ 0.03
LDB3-203ENST00000372056 GAKO14976 1311 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
LDB3-203ENST00000372056 GSG1L2A8MUP6 293 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 PRC1O43663 620 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 JAK2O60674 1132 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 TDO2P48775 406 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 ANTXR2P58335 489 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 DOK7Q18PE1 504 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 TMEM87AQ8NBN3 555 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 GPR101Q96P66 508 aaPredicted RBP15.24■□□□□ 0.03
LDB3-203ENST00000372056 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
LDB3-203ENST00000372056 ANAPC4Q9UJX5 808 aa15.24■□□□□ 0.03
LDB3-203ENST00000372056 GOLGA6L3A6NEY3 463 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 PDIA3P30101 505 aaKnown RBP15.23■□□□□ 0.03
LDB3-203ENST00000372056 IARSP41252 1262 aaKnown RBP15.23■□□□□ 0.03
LDB3-203ENST00000372056 AOC3Q16853 763 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 OLFM4Q6UX06 510 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 LCORLQ8N3X6 602 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 TEKT1Q969V4 418 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 KRT23Q9C075 422 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
LDB3-203ENST00000372056 ZNRF3Q9ULT6 936 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 SBK1Q52WX2 424 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 CDC37L1Q7L3B6 337 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 GPHNQ9NQX3 736 aaPredicted RBP15.23■□□□□ 0.03
LDB3-203ENST00000372056 SERPINA10Q9UK55 444 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 HDAC9Q9UKV0 1011 aa15.23■□□□□ 0.03
LDB3-203ENST00000372056 ISY1Q9ULR0 285 aaKnown RBP15.23■□□□□ 0.03
LDB3-203ENST00000372056 CHD4Q14839 1912 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 CTDNEP1O95476 244 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 MBD3O95983 291 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 TNIP1Q15025 636 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 DACT2Q5SW24 774 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 L1TD1Q5T7N2 865 aaKnown RBP15.22■□□□□ 0.03
LDB3-203ENST00000372056 MIGA1Q8NAN2 632 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 NSUN7Q8NE18 718 aaKnown RBP15.22■□□□□ 0.03
LDB3-203ENST00000372056 DBNDD1Q9H9R9 158 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 ARFGEF1Q9Y6D6 1849 aa15.22■□□□□ 0.03
LDB3-203ENST00000372056 TIAM2Q8IVF5 1701 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 PRKAB2O43741 272 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.03
LDB3-203ENST00000372056 CAVIN1Q6NZI2 390 aaKnown RBP15.21■□□□□ 0.03
LDB3-203ENST00000372056 USP48Q86UV5 1035 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 KLHL34Q8N239 644 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 FBXW7Q969H0 707 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 AATFQ9NY61 560 aaKnown RBP eCLIP15.21■□□□□ 0.03
LDB3-203ENST00000372056 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.03
LDB3-203ENST00000372056 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 FER1L6Q2WGJ9 1857 aa15.21■□□□□ 0.03
LDB3-203ENST00000372056 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
LDB3-203ENST00000372056 ZNF384Q8TF68 577 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
LDB3-203ENST00000372056 NEDD4P46934 1319 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 PTPDC1A2A3K4 754 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 VIL1P09327 827 aaKnown RBP15.2■□□□□ 0.02
LDB3-203ENST00000372056 RPS12P25398 132 aaKnown RBP15.2■□□□□ 0.02
LDB3-203ENST00000372056 USP5P45974 858 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
LDB3-203ENST00000372056 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
LDB3-203ENST00000372056 MFSD6Q6ZSS7 791 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 CYB5R4Q7L1T6 521 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 NKX2-3Q8TAU0 364 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 STAG1Q8WVM7 1258 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 BRPF3Q9ULD4 1205 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
LDB3-203ENST00000372056 PSME4Q14997 1843 aa15.19■□□□□ 0.02
LDB3-203ENST00000372056 BTDP43251 543 aa15.19■□□□□ 0.02
LDB3-203ENST00000372056 DNM1Q05193 864 aaKnown RBP15.19■□□□□ 0.02
LDB3-203ENST00000372056 AKNAD1Q5T1N1 836 aa15.19■□□□□ 0.02
LDB3-203ENST00000372056 TMTC2Q8N394 836 aa15.19■□□□□ 0.02
LDB3-203ENST00000372056 DDX11Q96FC9 970 aa15.19■□□□□ 0.02
LDB3-203ENST00000372056 NAP1L2Q9ULW6 460 aaPredicted RBP15.19■□□□□ 0.02
LDB3-203ENST00000372056 KLF18A0A0U1RQI7 1052 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 GOLGA8BA8MQT2 603 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 GADD45BO75293 160 aaPredicted RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 ZNF445P59923 1031 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 PDE4BQ07343 736 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 SART3Q15020 963 aaKnown RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 RSBN1LQ6PCB5 846 aaPredicted RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 GAS2L3Q86XJ1 694 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 TMEM87BQ96K49 555 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms