RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SLC26A6Q9BXS9 759 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 RNF41Q9H4P4 317 aaPredicted RBP33.56■■■□□ 2.96
SSBP3-204ENST00000371320 RAI14Q9P0K7 980 aa33.56■■■□□ 2.96
SSBP3-204ENST00000371320 AXDND1Q5T1B0 1012 aaPredicted RBP33.55■■■□□ 2.96
SSBP3-204ENST00000371320 SARM1Q6SZW1 724 aa33.55■■■□□ 2.96
SSBP3-204ENST00000371320 CEP57L1Q8IYX8 460 aa33.55■■■□□ 2.96
SSBP3-204ENST00000371320 STK36Q9NRP7 1315 aa33.55■■■□□ 2.96
SSBP3-204ENST00000371320 A0A087WWV3 80 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 CMA1P23946 247 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 UQCRHLA0A096LP55 91 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 UQCRHP07919 91 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 GTF2E1P29083 439 aaPredicted RBP33.54■■■□□ 2.96
SSBP3-204ENST00000371320 KCNQ4P56696 695 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 WTAPQ15007 396 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 BICDL1Q6ZP65 573 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 ADGRA1Q86SQ6 560 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 STK11IPQ8N1F8 1099 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 ZKSCAN3Q9BRR0 538 aa33.54■■■□□ 2.96
SSBP3-204ENST00000371320 NAT10Q9H0A0 1025 aaKnown RBP33.54■■■□□ 2.96
SSBP3-204ENST00000371320 ERICH2A1L162 156 aa33.53■■■□□ 2.96
SSBP3-204ENST00000371320 FMNL1O95466 1100 aaPredicted RBP33.53■■■□□ 2.96
SSBP3-204ENST00000371320 CHD4Q14839 1912 aa33.53■■■□□ 2.96
SSBP3-204ENST00000371320 CAVIN4Q5BKX8 364 aa33.53■■■□□ 2.96
SSBP3-204ENST00000371320 CLIP2Q9UDT6 1046 aa33.53■■■□□ 2.96
SSBP3-204ENST00000371320 MAGEB6P1A0A0J9YX57 407 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 UBAP1LF5GYI3 381 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 IFNAR1P17181 557 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 U2AF2P26368 475 aaKnown RBP eCLIP33.52■■■□□ 2.96
SSBP3-204ENST00000371320 CDC25BP30305 580 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 PPARAQ07869 468 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 DHX40Q8IX18 779 aaKnown RBP33.52■■■□□ 2.96
SSBP3-204ENST00000371320 MTA3Q9BTC8 594 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 KIAA1468Q9P260 1216 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 NID2Q14112 1375 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 WTIPA6NIX2 430 aaPredicted RBP33.52■■■□□ 2.96
SSBP3-204ENST00000371320 ZNF202O95125 648 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 MARCKSP29966 332 aaPredicted RBP33.52■■■□□ 2.96
SSBP3-204ENST00000371320 WASF1Q92558 559 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 NRBP1Q9UHY1 535 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 MINPP1Q9UNW1 487 aa33.52■■■□□ 2.96
SSBP3-204ENST00000371320 ZRSR1Q15695 479 aaKnown RBP33.51■■■□□ 2.96
SSBP3-204ENST00000371320 TMTC2Q8N394 836 aa33.51■■■□□ 2.96
SSBP3-204ENST00000371320 WDHD1O75717 1129 aaPredicted RBP33.51■■■□□ 2.95
SSBP3-204ENST00000371320 PFKFB1P16118 471 aa33.51■■■□□ 2.95
SSBP3-204ENST00000371320 JMYQ8N9B5 988 aa33.51■■■□□ 2.95
SSBP3-204ENST00000371320 CNTNAP4Q9C0A0 1308 aa33.5■■■□□ 2.95
SSBP3-204ENST00000371320 RTN1Q16799 776 aa33.5■■■□□ 2.95
SSBP3-204ENST00000371320 SDR42E1Q8WUS8 393 aa33.5■■■□□ 2.95
SSBP3-204ENST00000371320 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.5■■■□□ 2.95
SSBP3-204ENST00000371320 PPP6R2O75170 966 aa33.49■■■□□ 2.95
SSBP3-204ENST00000371320 TBC1D9BQ66K14 1250 aa33.49■■■□□ 2.95
SSBP3-204ENST00000371320 FBXW7Q969H0 707 aa33.49■■■□□ 2.95
SSBP3-204ENST00000371320 MINDY4BA8MYZ0 360 aa33.49■■■□□ 2.95
SSBP3-204ENST00000371320 UBE2Q2LH0YL09 131 aa33.49■■■□□ 2.95
SSBP3-204ENST00000371320 SLC10A5Q5PT55 438 aa33.49■■■□□ 2.95
SSBP3-204ENST00000371320 ZNF831Q5JPB2 1677 aa33.48■■■□□ 2.95
SSBP3-204ENST00000371320 RGL2O15211 777 aa33.48■■■□□ 2.95
SSBP3-204ENST00000371320 SLC3A2P08195 630 aaKnown RBP33.48■■■□□ 2.95
SSBP3-204ENST00000371320 TRIM22Q8IYM9 498 aa33.48■■■□□ 2.95
SSBP3-204ENST00000371320 PTPAQ15257 358 aa33.48■■■□□ 2.95
SSBP3-204ENST00000371320 AOPEPQ8N6M6 819 aa33.48■■■□□ 2.95
SSBP3-204ENST00000371320 CELF1Q92879 486 aaKnown RBP33.48■■■□□ 2.95
SSBP3-204ENST00000371320 MRFAP1L1Q96HT8 127 aa33.48■■■□□ 2.95
SSBP3-204ENST00000371320 UBAC1Q9BSL1 405 aa33.48■■■□□ 2.95
SSBP3-204ENST00000371320 COL1A1P02452 1464 aaPredicted RBP33.47■■■□□ 2.95
SSBP3-204ENST00000371320 FAM84BQ96KN1 310 aaPredicted RBP33.47■■■□□ 2.95
SSBP3-204ENST00000371320 MAP3K14Q99558 947 aa33.47■■■□□ 2.95
SSBP3-204ENST00000371320 ANAPC4Q9UJX5 808 aa33.47■■■□□ 2.95
SSBP3-204ENST00000371320 MROH7-TTC4A0A0A0MT08 1334 aa33.47■■■□□ 2.95
SSBP3-204ENST00000371320 CCDC196A0A1B0GTZ2 297 aa33.46■■■□□ 2.95
SSBP3-204ENST00000371320 SMIM5Q71RC9 77 aa33.46■■■□□ 2.95
SSBP3-204ENST00000371320 BCL2L12Q9HB09 334 aa33.46■■■□□ 2.95
SSBP3-204ENST00000371320 RIOK1Q9BRS2 568 aaKnown RBP33.46■■■□□ 2.95
SSBP3-204ENST00000371320 ESR2Q92731 530 aa33.45■■■□□ 2.95
SSBP3-204ENST00000371320 GUCY1A2P33402 732 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 RCAN1P53805 252 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 SAFBQ15424 915 aaKnown RBP eCLIP33.44■■■□□ 2.94
SSBP3-204ENST00000371320 PRIMPOLQ96LW4 560 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 NYXQ9GZU5 481 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 ECM29Q5VYK3 1845 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 SYKP43405 635 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 LRMPQ12912 555 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 ZNF654Q8IZM8 581 aa33.44■■■□□ 2.94
SSBP3-204ENST00000371320 RBM6P78332 1123 aaKnown RBP33.43■■■□□ 2.94
SSBP3-204ENST00000371320 VPS72Q15906 364 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 NOSTRINQ8IVI9 506 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 FANCBQ8NB91 859 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 TIGD1Q96MW7 591 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 NARFQ9UHQ1 456 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 MMP1P03956 469 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 DPCR1Q3MIW9 517 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 CRACR2BQ8N4Y2 399 aaPredicted RBP33.43■■■□□ 2.94
SSBP3-204ENST00000371320 NUP133Q8WUM0 1156 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 NGLY1Q96IV0 654 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 SETDB2Q96T68 719 aa33.43■■■□□ 2.94
SSBP3-204ENST00000371320 SHC4Q6S5L8 630 aa33.42■■■□□ 2.94
SSBP3-204ENST00000371320 PTF1AQ7RTS3 328 aa33.42■■■□□ 2.94
SSBP3-204ENST00000371320 NBPF11Q86T75 865 aa33.42■■■□□ 2.94
SSBP3-204ENST00000371320 CCDC82Q8N4S0 544 aa33.42■■■□□ 2.94
SSBP3-204ENST00000371320 C8orf37Q96NL8 207 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms