RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZFPM1Q8IX07 1006 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 RUFY2Q8WXA3 655 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 GBA2Q9HCG7 927 aaPredicted RBP8.32□□□□□ -1.08
USP1-202ENST00000371146 PTMSP20962 102 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 GNL2Q13823 731 aaKnown RBP8.32□□□□□ -1.08
USP1-202ENST00000371146 SMC1BQ8NDV3 1235 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 UBAC1Q9BSL1 405 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 BTAF1O14981 1849 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 CICQ96RK0 1608 aaPredicted RBP8.32□□□□□ -1.08
USP1-202ENST00000371146 MYH14Q7Z406 1995 aaKnown RBP8.32□□□□□ -1.08
USP1-202ENST00000371146 ZNF213O14771 459 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 RGL2O15211 777 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 SP4Q02446 784 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 CENPQQ7L2Z9 268 aaPredicted RBP8.32□□□□□ -1.08
USP1-202ENST00000371146 LRRC47Q8N1G4 583 aaKnown RBP8.32□□□□□ -1.08
USP1-202ENST00000371146 LCORLQ8N3X6 602 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 DCTPP1Q9H773 170 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 GPCPD1Q9NPB8 672 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 LRRC37A3O60309 1634 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 MARCH6O60337 910 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 PEX10O60683 326 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 SLC3A2P08195 630 aaKnown RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 DGKZQ13574 1117 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 ZRSR1Q15695 479 aaKnown RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 ZNF70Q9UC06 446 aaPredicted RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 DAGLAQ9Y4D2 1042 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 ZKSCAN1P17029 563 aaPredicted RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 SDSP20132 328 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 SETQ01105 290 aaPredicted RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 TTF1Q15361 905 aaPredicted RBP8.31□□□□□ -1.08
USP1-202ENST00000371146 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 PLCD3Q8N3E9 789 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 CLIP2Q9UDT6 1046 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 LMO7Q8WWI1 1683 aa8.31□□□□□ -1.08
USP1-202ENST00000371146 GH2P01242 217 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 CASP7P55210 303 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 MYL10Q9BUA6 226 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 CPVLQ9H3G5 476 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 AK9Q5TCS8 1911 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 CCDC85CA6NKD9 419 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 CPLX1O14810 134 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 GOLGA8HP0CJ92 632 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 HIRAP54198 1017 aaPredicted RBP8.3□□□□□ -1.08
USP1-202ENST00000371146 DACT2Q5SW24 774 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 ANO1Q5XXA6 986 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 CDC42EP5Q6NZY7 148 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 EEPD1Q7L9B9 569 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 KIFC2Q96AC6 838 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 TRIOBPQ9H2D6 2365 aa8.3□□□□□ -1.08
USP1-202ENST00000371146 TBC1D8O95759 1140 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 IREB2P48200 963 aaKnown RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 HMGCS2P54868 508 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 CMTR1Q8N1G2 835 aaKnown RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 PSMD1Q99460 953 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 AOX1Q06278 1338 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 B4E1Z4 1266 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 RNF113AO15541 343 aaKnown RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 TPM2P07951 284 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 CCT2P78371 535 aaKnown RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 AKAP17AQ02040 695 aaKnown RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 EVX2Q03828 476 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 CERKLQ49MI3 558 aaPredicted RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 MCTP1Q6DN14 999 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 TMED8Q6PL24 325 aaPredicted RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 TTC6Q86TZ1 520 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 MICU3Q86XE3 530 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 CDCA5Q96FF9 252 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 NUP88Q99567 741 aaPredicted RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 MRC1P22897 1456 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 COL18A1P39060 1754 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 IFIT3O14879 490 aaKnown RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 RFX5P48382 616 aaPredicted RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 TAF1CQ15572 869 aaPredicted RBP8.29□□□□□ -1.08
USP1-202ENST00000371146 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 MAP7D2Q96T17 732 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 ZNF341Q9BYN7 854 aa8.29□□□□□ -1.08
USP1-202ENST00000371146 TFAP4Q01664 338 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 SHROOM1Q2M3G4 852 aaPredicted RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 NSMFQ6X4W1 530 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 TMOD4Q9NZQ9 345 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 PKD2L1Q9P0L9 805 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 NWD2Q9ULI1 1742 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 A0A0D9SFI3 127 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 CLCN1P35523 988 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 IMMTQ16891 758 aaKnown RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 USH1GQ495M9 461 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 FAM43BQ6ZT52 329 aaPredicted RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 TDRD7Q8NHU6 1098 aaKnown RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 OSBP2Q969R2 916 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 JAKMIP1Q96N16 626 aaKnown RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 COL22A1Q8NFW1 1626 aaPredicted RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 MAST3O60307 1309 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 DDTLA6NHG4 134 aaPredicted RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 RABL6Q3YEC7 729 aaPredicted RBP8.28□□□□□ -1.08
USP1-202ENST00000371146 DCAF15Q66K64 600 aa8.28□□□□□ -1.08
USP1-202ENST00000371146 EVI5LQ96CN4 794 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms