RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 MRRFQ96E11 262 aaKnown RBP24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 TMEM87BQ96K49 555 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 FAM227BQ96M60 508 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 SH2D4AQ9H788 454 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 CNNM4Q6P4Q7 775 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 FAM76AQ8TAV0 307 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 POLR2DO15514 142 aaKnown RBP24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 TUBB4BP68371 445 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 OTUD7BQ6GQQ9 843 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 METTL22Q9BUU2 404 aaPredicted RBP24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 PPP1R21Q6ZMI0 780 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 TRIM7Q9C029 511 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 SNX14Q9Y5W7 946 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 MAP3K19Q56UN5 1328 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 INF2Q27J81 1249 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 EVCP57679 992 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 CTDSPL2Q05D32 466 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 CCDC26Q8TAB7 109 aa24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 AATFQ9NY61 560 aaKnown RBP eCLIP24.8■■□□□ 1.56
TM9SF3-201ENST00000371142 STX10O60499 249 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 GTF3C6Q969F1 213 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 DDX39AO00148 427 aaKnown RBP24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 NCAPH2Q6IBW4 605 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 HDXQ7Z353 690 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 GPIHBP1Q8IV16 184 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 JAKMIP2Q96AA8 810 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 TAF5LO75529 589 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 SNX16P57768 344 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 MYL10Q9BUA6 226 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 GPAA1O43292 621 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 GTF2A1P52655 376 aaPredicted RBP24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 FAM173BQ6P4H8 233 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 ZNF790Q6PG37 636 aa24.79■■□□□ 1.56
TM9SF3-201ENST00000371142 SYNRGQ9UMZ2 1314 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 ASIC2Q16515 512 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 SMTNP53814 917 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 C19orf44Q9H6X5 657 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 CALUO43852 315 aaPredicted RBP24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 SETDB1Q15047 1291 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 UTP14CQ5TAP6 766 aaKnown RBP24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 KIFC2Q96AC6 838 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 DTNBO60941 627 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 IGSF3O75054 1194 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 NDUFB9Q9Y6M9 179 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 YTHDC2Q9H6S0 1430 aaKnown RBP24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 TPD52P55327 224 aaPredicted RBP24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 ARFGAP2Q8N6H7 521 aa24.78■■□□□ 1.56
TM9SF3-201ENST00000371142 CSGALNACT2Q8N6G5 542 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 SMC1BQ8NDV3 1235 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 EIF2AK4Q9P2K8 1649 aaKnown RBP24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 MYCLP12524 364 aaPredicted RBP24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 HPDP32754 393 aaPredicted RBP24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 PICK1Q9NRD5 415 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 ANGEL1Q9UNK9 670 aaKnown RBP24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 PTPRKQ15262 1439 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 RBSNQ9H1K0 784 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 E7EVH7 732 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 ARHGEF10LQ9HCE6 1279 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 ERCC3P19447 782 aa24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 NAPGQ99747 312 aaPredicted RBP24.77■■□□□ 1.56
TM9SF3-201ENST00000371142 IRX5P78411 483 aaPredicted RBP24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 HAUS3Q68CZ6 603 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 CYP26C1Q6V0L0 522 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 DAAM2Q86T65 1068 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 FMNL3Q8IVF7 1028 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 TTC38Q5R3I4 469 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 RNF34Q969K3 372 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 PDE8AO60658 829 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 ERCC5P28715 1186 aaPredicted RBP24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 PPP1R2P41236 205 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 VWA3BQ502W6 1294 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 APPBP2Q92624 585 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 TBC1D7Q9P0N9 293 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 ITSN2Q9NZM3 1697 aa24.76■■□□□ 1.55
TM9SF3-201ENST00000371142 LONRF3Q496Y0 759 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 DIS3L2Q8IYB7 885 aaKnown RBP24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 TMOD4Q9NZQ9 345 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 HS1BP3Q53T59 392 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 FAM204AQ9H8W3 233 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 GAS8O95995 478 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 VIMP08670 466 aaKnown RBP24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 ALDH3A1P30838 453 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 NKIRAS1Q9NYS0 192 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 GGA1Q9UJY5 639 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 CCNL1Q9UK58 526 aaPredicted RBP24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 U2AF2P26368 475 aaKnown RBP eCLIP24.75■■□□□ 1.553e-8■■■■□ 20.2
TM9SF3-201ENST00000371142 STRN3Q13033 797 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 PHKBQ93100 1093 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 SH3TC1Q8TE82 1336 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 ASXL2Q76L83 1435 aa24.75■■□□□ 1.55
TM9SF3-201ENST00000371142 SH3BP5O60239 455 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 FANCCQ00597 558 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 PAK1Q13153 545 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 TRPC3Q13507 836 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 TRIM14Q14142 442 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 IFT74Q96LB3 600 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 TRPM2O94759 1503 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms