RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 CCDC91Q7Z6B0 441 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 KIRREL3Q8IZU9 778 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 NWD2Q9ULI1 1742 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 CACNA1FO60840 1977 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 TAF5LO75529 589 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 ZNF202O95125 648 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 ERCC3P19447 782 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 NLRP12P59046 1061 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 APTXQ7Z2E3 356 aaKnown RBP9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 PRPF38AQ8NAV1 312 aaKnown RBP9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 XAGE3Q8WTP9 111 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 ZKSCAN4Q969J2 545 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 EAF2Q96CJ1 260 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 PCMTD1Q96MG8 357 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 NBPF3Q9H094 633 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 MCM8Q9UJA3 840 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 TBX22Q9Y458 520 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 FAM169AQ9Y6X4 670 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 NHSL1Q5SYE7 1610 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 COBLO75128 1261 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 SATB1Q01826 763 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 CFAP100Q494V2 611 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 HDXQ7Z353 690 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 MICU3Q86XE3 530 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 LINC00301Q8NCQ3 95 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 JPH2Q9BR39 696 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 DEF6Q9H4E7 631 aa9.99□□□□□ -0.81
SMARCA1-203ENST00000371123 hCG_1642624A0A1W2PR95 340 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 EME2A4GXA9 379 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 PATL2C9JE40 543 aaKnown RBP9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 CTAGE5O15320 804 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 ATP2B2Q01814 1243 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 C11orf91Q3C1V1 193 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 USPL1Q5W0Q7 1092 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 UIMC1Q96RL1 719 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 CDC5LQ99459 802 aaKnown RBP9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 LZTFL1Q9NQ48 299 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 C21orf2O43822 256 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 CYP21A2P08686 494 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 PDCP20941 246 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 AARSP49588 968 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 TRDNQ13061 729 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 NCAPH2Q6IBW4 605 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 IL17REQ8NFR9 667 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 EEF2KMTQ96G04 330 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 ABCF2Q9UG63 623 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 HPCAL4Q9UM19 191 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 TFR2Q9UP52 801 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 ZMYND10O75800 440 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 PSMA5P28066 241 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 UBASH3AP57075 661 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 PNOCQ13519 176 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 ANKRD20A12PQ8NF67 263 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 MKRN1Q9UHC7 482 aaKnown RBP9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 ZNF609O15014 1411 aa9.98□□□□□ -0.81
SMARCA1-203ENST00000371123 PXDNLA1KZ92 1463 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 AMPD2Q01433 879 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 GOLGA6L1Q8N7Z2 621 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 CCDC12Q8WUD4 166 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 MIEF2Q96C03 454 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 MYL10Q9BUA6 226 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 RAI14Q9P0K7 980 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 SAMM50Q9Y512 469 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 MST1RQ04912 1400 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 RTN2O75298 545 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 ERLIN2O94905 339 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 TPM1P09493 284 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 ATP6V1AP38606 617 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 IRAK1P51617 712 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 FAM71BQ8TC56 605 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 ZKSCAN3Q9BRR0 538 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 PTPDC1A2A3K4 754 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 TEX33O43247 280 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 GGCXP38435 758 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 ENOX2Q16206 610 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 HSP90AB4PQ58FF6 505 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 LMBR1LQ6UX01 489 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 METTL16Q86W50 562 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 CMTR1Q8N1G2 835 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 BAG1Q99933 345 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 TUBE1Q9UJT0 475 aa9.97□□□□□ -0.81
SMARCA1-203ENST00000371123 KIF1AQ12756 1690 aa9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 ARHGAP25P42331 645 aa9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 BEND3Q5T5X7 828 aa9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 ADALQ6DHV7 355 aa9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 PROSER2Q86WR7 435 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 MRPS27Q92552 414 aaKnown RBP9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 TRIM10Q9UDY6 481 aa9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 MED1Q15648 1581 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-203ENST00000371123 MINDY4BA8MYZ0 360 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 ARHGAP6O43182 974 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 TUBB4AP04350 444 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 CABP4P57796 275 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 TBC1D8BQ0IIM8 1120 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 ERC1Q8IUD2 1116 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 CNNM1Q9NRU3 951 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
SMARCA1-203ENST00000371123 C4AP0C0L4 1744 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms