RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ZNF34Q8IZ26 560 aa8.19□□□□□ -1.1
TGFBR3-202ENST00000370399 DCCP43146 1447 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 CSF1RP07333 972 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 ZNF76P36508 570 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 PDE4CQ08493 712 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 MYSM1Q5VVJ2 828 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 BRAPQ7Z569 592 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 SMTNL1A8MU46 457 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 IPO7O95373 1038 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 HSP90AA2PQ14568 343 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 STAMQ92783 540 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 RGPD8O14715 1765 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 GOLGA8HP0CJ92 632 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 IDEP14735 1019 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 INTS5Q6P9B9 1019 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 FANCBQ8NB91 859 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 FBXO18Q8NFZ0 1043 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 SMARCE1Q969G3 411 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 RRAGDQ9NQL2 400 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 BSDC1Q9NW68 430 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 TTF2Q9UNY4 1162 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 ZNF609O15014 1411 aa8.18□□□□□ -1.1
TGFBR3-202ENST00000370399 DEXIO95424 95 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 FAM160A1Q05DH4 1040 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 PIK3AP1Q6ZUJ8 805 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 TMC6Q7Z403 805 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 SPATA31A5Q5VU36 1347 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 SPATA31A7Q8IWB4 1347 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 COL5A2P05997 1499 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 STX17P56962 302 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 DACH1Q9UI36 760 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.12e-6■■□□□ 13.1
TGFBR3-202ENST00000370399 HMGB2P26583 209 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 CASP7P55210 303 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 MECOMQ03112 1051 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 NFIXQ14938 502 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 CLIC4Q9Y696 253 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 KRT2P35908 639 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 DYNLL2Q96FJ2 89 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 FEZ1Q99689 392 aa8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 MAGEC2Q9UBF1 373 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-202ENST00000370399 RTL9Q8NET4 1388 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 H0YIN7 160 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 PLCG2P16885 1265 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 PPFIBP1Q86W92 1011 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 CLIC6Q96NY7 704 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 ZNF202O95125 648 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 CALM1P0DP23 149 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 CALM2P0DP24 149 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 CALM3P0DP25 149 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 UVSSAQ2YD98 709 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 CYB5R4Q7L1T6 521 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 C17orf53Q8N3J3 647 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 ZSCAN10Q96SZ4 725 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 TANGO6Q9C0B7 1094 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 DBNDD1Q9H9R9 158 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 TCP11L1Q9NUJ3 509 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 NCOA3Q9Y6Q9 1424 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 WTIPA6NIX2 430 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 POLR2DO15514 142 aaKnown RBP8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 CYP2D6P10635 497 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 BTDP43251 543 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 TNNI2P48788 182 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 GNAQP50148 359 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 STIM1Q13586 685 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 VPS72Q15906 364 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 FAM84BQ96KN1 310 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 PIK3C2AO00443 1686 aa8.16□□□□□ -1.1
TGFBR3-202ENST00000370399 CAMTA1Q9Y6Y1 1673 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 MMP10P09238 476 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 PTGS1P23219 599 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 LETM2Q2VYF4 491 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 EYA3Q99504 573 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 PCDHA7Q9UN72 937 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 CARMIL3Q8ND23 1372 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 XDHP47989 1333 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 NAP1L1P55209 391 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 NR5A1Q13285 461 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 PLA2G12BQ9BX93 195 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 TMX1Q9H3N1 280 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 CBX8Q9HC52 389 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 STK32BQ9NY57 414 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 PEAK1Q9H792 1746 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 NEDD4P46934 1319 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 NTSR2O95665 410 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 TOP1P11387 765 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 EPS15P42566 896 aa8.15□□□□□ -1.1
TGFBR3-202ENST00000370399 COL9A3Q14050 684 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms