RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 ARHGAP24Q8N264 748 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
COL11A1-203ENST00000370096 PTPROQ16827 1216 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
COL11A1-203ENST00000370096 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 VPS37BQ9H9H4 285 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 ELP1O95163 1332 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 ARHGAP25P42331 645 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 IL1RL1Q01638 556 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 MIER3Q7Z3K6 550 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 TRPC3Q13507 836 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 WDR46O15213 610 aaKnown RBP12.37□□□□□ -0.43
COL11A1-203ENST00000370096 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL11A1-203ENST00000370096 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 PCDHB15Q9Y5E8 787 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 DDX39AO00148 427 aaKnown RBP12.37□□□□□ -0.43
COL11A1-203ENST00000370096 CALML3P27482 149 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
COL11A1-203ENST00000370096 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-203ENST00000370096 STK10O94804 968 aaKnown RBP12.36□□□□□ -0.43
COL11A1-203ENST00000370096 INPP1P49441 399 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 IQUBQ8NA54 791 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 SYNRGQ9UMZ2 1314 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 ACSBG1Q96GR2 724 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 RIMBP2O15034 1052 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
COL11A1-203ENST00000370096 RPSAP08865 295 aaKnown RBP12.36□□□□□ -0.43
COL11A1-203ENST00000370096 RPL13P26373 211 aaKnown RBP12.36□□□□□ -0.43
COL11A1-203ENST00000370096 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-203ENST00000370096 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 ATP1A2P50993 1020 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 LIN9Q5TKA1 542 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 PDZD8Q8NEN9 1154 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 FANCCQ00597 558 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 ANKRD20A3Q5VUR7 823 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 EXOC5O00471 708 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 RAD51AP2Q09MP3 1159 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 RAB3IPQ96QF0 476 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-203ENST00000370096 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
COL11A1-203ENST00000370096 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 SPDL1Q96EA4 605 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 CTTNBP2NLQ9P2B4 639 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 RPS6KA2Q15349 733 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 PLCB1Q9NQ66 1216 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 RUFY4Q6ZNE9 571 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 CALUO43852 315 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-203ENST00000370096 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
COL11A1-203ENST00000370096 MTX1Q13505 466 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 PIK3AP1Q6ZUJ8 805 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 POLKQ9UBT6 870 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 FAF1Q9UNN5 650 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-203ENST00000370096 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
COL11A1-203ENST00000370096 TUBBP07437 444 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 CCDC89Q8N998 374 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 TSC1Q92574 1164 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 CACYBPQ9HB71 228 aaKnown RBP12.35□□□□□ -0.43
COL11A1-203ENST00000370096 TAB2Q9NYJ8 693 aa12.35□□□□□ -0.43
COL11A1-203ENST00000370096 FOXO3O43524 673 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 GNGT1P63211 74 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 RILPL1Q5EBL4 403 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 STX2P32856 288 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 SLC39A6Q13433 755 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 KRT71Q3SY84 523 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 LRCH2Q5VUJ6 765 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 CCDC13Q8IYE1 715 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 CSGALNACT2Q8N6G5 542 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 SNX21Q969T3 373 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 GINS2Q9Y248 185 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 C8orf34Q49A92 452 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 CBX8Q9HC52 389 aa12.34□□□□□ -0.43
COL11A1-203ENST00000370096 HS1BP3Q53T59 392 aa12.33□□□□□ -0.43
COL11A1-203ENST00000370096 DYMQ7RTS9 669 aa12.33□□□□□ -0.43
COL11A1-203ENST00000370096 BRAPQ7Z569 592 aa12.33□□□□□ -0.43
COL11A1-203ENST00000370096 FCHSD1Q86WN1 690 aa12.33□□□□□ -0.43
COL11A1-203ENST00000370096 TRIM4Q9C037 500 aa12.33□□□□□ -0.43
COL11A1-203ENST00000370096 PFDN1O60925 122 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 LRMPQ12912 555 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 RBBP5Q15291 538 aaKnown RBP12.33□□□□□ -0.44
COL11A1-203ENST00000370096 ZSCAN26Q16670 478 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 PPFIA2O75334 1257 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
COL11A1-203ENST00000370096 SERPINB6P35237 376 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 LIG3P49916 1009 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-203ENST00000370096 UHMK1Q8TAS1 419 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms