RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TEKT1Q969V4 418 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 TCEANC2Q96MN5 208 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 WDR33Q9C0J8 1336 aaKnown RBP20.45■□□□□ 0.86
UBE3D-203ENST00000369747 GPR75-ASB3A0A0A6YYF3 556 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 CRKP46108 304 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 TOB2Q14106 344 aaPredicted RBP20.45■□□□□ 0.86
UBE3D-203ENST00000369747 L1TD1Q5T7N2 865 aaKnown RBP20.45■□□□□ 0.86
UBE3D-203ENST00000369747 HHIPL2Q6UWX4 724 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 AGBL3Q8NEM8 1001 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 SDR42E1Q8WUS8 393 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 SMC3Q9UQE7 1217 aa20.45■□□□□ 0.86
UBE3D-203ENST00000369747 APPP05067 770 aa20.44■□□□□ 0.86
UBE3D-203ENST00000369747 ANKRD1Q15327 319 aa20.44■□□□□ 0.86
UBE3D-203ENST00000369747 SH3RF3Q8TEJ3 882 aaPredicted RBP20.44■□□□□ 0.86
UBE3D-203ENST00000369747 SLC4A4Q9Y6R1 1079 aa20.44■□□□□ 0.86
UBE3D-203ENST00000369747 TIAM2Q8IVF5 1701 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 SHTN1A0MZ66 631 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 GSG1L2A8MUP6 293 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 PRPF40AO75400 957 aaKnown RBP20.43■□□□□ 0.86
UBE3D-203ENST00000369747 BAG3O95817 575 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 RBM5P52756 815 aaKnown RBP eCLIP20.43■□□□□ 0.86
UBE3D-203ENST00000369747 PPP4CP60510 307 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 APOBEC3HQ6NTF7 200 aaKnown RBP20.43■□□□□ 0.86
UBE3D-203ENST00000369747 NEK1Q96PY6 1258 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 FGAP02671 866 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 USP17L8P0C7I0 530 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 MRIQ9BWK5 157 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 EPB41L4AQ9HCS5 686 aaPredicted RBP20.43■□□□□ 0.86
UBE3D-203ENST00000369747 SERPINA10Q9UK55 444 aa20.43■□□□□ 0.86
UBE3D-203ENST00000369747 PATL2C9JE40 543 aaKnown RBP20.42■□□□□ 0.86
UBE3D-203ENST00000369747 SYT1P21579 422 aa20.42■□□□□ 0.86
UBE3D-203ENST00000369747 GMPSP49915 693 aaPredicted RBP20.42■□□□□ 0.86
UBE3D-203ENST00000369747 RHBDL3P58872 404 aa20.42■□□□□ 0.86
UBE3D-203ENST00000369747 HDLBPQ00341 1268 aaKnown RBP20.42■□□□□ 0.86
UBE3D-203ENST00000369747 OGFOD1Q8N543 542 aa20.42■□□□□ 0.86
UBE3D-203ENST00000369747 NECAB1Q8N987 351 aa20.42■□□□□ 0.86
UBE3D-203ENST00000369747 ZDHHC15Q96MV8 337 aa20.42■□□□□ 0.86
UBE3D-203ENST00000369747 NOL10Q9BSC4 688 aaKnown RBP20.42■□□□□ 0.86
UBE3D-203ENST00000369747 GJB2P29033 226 aa20.41■□□□□ 0.86
UBE3D-203ENST00000369747 STOX1Q6ZVD7 989 aa20.41■□□□□ 0.86
UBE3D-203ENST00000369747 STX6O43752 255 aa20.41■□□□□ 0.86
UBE3D-203ENST00000369747 GNAT2P19087 354 aa20.41■□□□□ 0.86
UBE3D-203ENST00000369747 CFAP100Q494V2 611 aa20.41■□□□□ 0.86
UBE3D-203ENST00000369747 IFNL3Q8IZI9 196 aa20.41■□□□□ 0.86
UBE3D-203ENST00000369747 ZSCAN22P10073 491 aaPredicted RBP20.4■□□□□ 0.86
UBE3D-203ENST00000369747 GPT2Q8TD30 523 aa20.4■□□□□ 0.86
UBE3D-203ENST00000369747 CRNKL1Q9BZJ0 848 aaKnown RBP20.4■□□□□ 0.86
UBE3D-203ENST00000369747 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
UBE3D-203ENST00000369747 RPS12P25398 132 aaKnown RBP20.39■□□□□ 0.86
UBE3D-203ENST00000369747 GPC2Q8N158 579 aa20.39■□□□□ 0.86
UBE3D-203ENST00000369747 PRMT6Q96LA8 375 aaPredicted RBP20.39■□□□□ 0.86
UBE3D-203ENST00000369747 HDAC9Q9UKV0 1011 aa20.39■□□□□ 0.86
UBE3D-203ENST00000369747 CDK5RAP2Q96SN8 1893 aa20.39■□□□□ 0.85
UBE3D-203ENST00000369747 DTNBO60941 627 aa20.39■□□□□ 0.85
UBE3D-203ENST00000369747 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
UBE3D-203ENST00000369747 CDC42EP5Q6NZY7 148 aa20.39■□□□□ 0.85
UBE3D-203ENST00000369747 TGFBRAP1Q8WUH2 860 aa20.39■□□□□ 0.85
UBE3D-203ENST00000369747 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
UBE3D-203ENST00000369747 BAZ2AQ9UIF9 1905 aaKnown RBP20.39■□□□□ 0.85
UBE3D-203ENST00000369747 EGFRP00533 1210 aa20.38■□□□□ 0.85
UBE3D-203ENST00000369747 XRCC6P12956 609 aaKnown RBP eCLIP20.38■□□□□ 0.85
UBE3D-203ENST00000369747 GAS2L3Q86XJ1 694 aa20.38■□□□□ 0.85
UBE3D-203ENST00000369747 TEX11Q8IYF3 940 aa20.38■□□□□ 0.85
UBE3D-203ENST00000369747 DPF2Q92785 391 aa20.38■□□□□ 0.85
UBE3D-203ENST00000369747 DCP1AQ9NPI6 582 aaPredicted RBP20.38■□□□□ 0.85
UBE3D-203ENST00000369747 USP40Q9NVE5 1235 aa20.38■□□□□ 0.85
UBE3D-203ENST00000369747 CNOT7Q9UIV1 285 aaKnown RBP20.38■□□□□ 0.85
UBE3D-203ENST00000369747 PLCG2P16885 1265 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 HAND2P61296 217 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 Q6ZUG5 572 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 MICALL2Q8IY33 904 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 NAPBQ9H115 298 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 SPDYE2BA6NHP3 402 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 SPDYE6P0CI01 402 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 TDO2P48775 406 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 CACNB3P54284 484 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 ALX1Q15699 326 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 MAPKAPK5Q8IW41 473 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 NACAP1Q9BZK3 213 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 TDRD3Q9H7E2 651 aaKnown RBP20.37■□□□□ 0.85
UBE3D-203ENST00000369747 MYOZ2Q9NPC6 264 aa20.37■□□□□ 0.85
UBE3D-203ENST00000369747 MKRN1Q9UHC7 482 aaKnown RBP20.37■□□□□ 0.85
UBE3D-203ENST00000369747 SMIM22K7EJ46 135 aa20.36■□□□□ 0.85
UBE3D-203ENST00000369747 WDHD1O75717 1129 aaPredicted RBP20.36■□□□□ 0.85
UBE3D-203ENST00000369747 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
UBE3D-203ENST00000369747 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
UBE3D-203ENST00000369747 USP5P45974 858 aa20.36■□□□□ 0.85
UBE3D-203ENST00000369747 ZNF280AP59817 542 aaPredicted RBP20.36■□□□□ 0.85
UBE3D-203ENST00000369747 DLGAP5Q15398 846 aa20.36■□□□□ 0.85
UBE3D-203ENST00000369747 FOXD4L6Q3SYB3 417 aaPredicted RBP20.36■□□□□ 0.85
UBE3D-203ENST00000369747 CAVIN1Q6NZI2 390 aaKnown RBP20.36■□□□□ 0.85
UBE3D-203ENST00000369747 FOXD4L3Q6VB84 417 aaPredicted RBP20.36■□□□□ 0.85
UBE3D-203ENST00000369747 CERS3Q8IU89 383 aa20.36■□□□□ 0.85
UBE3D-203ENST00000369747 ATP8A2Q9NTI2 1148 aa20.36■□□□□ 0.85
UBE3D-203ENST00000369747 F13A1P00488 732 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 EVX2Q03828 476 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 NFIAQ12857 509 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 RBM26Q5T8P6 1007 aaKnown RBP20.35■□□□□ 0.85
UBE3D-203ENST00000369747 SAMD7Q7Z3H4 446 aa20.35■□□□□ 0.85
UBE3D-203ENST00000369747 CTNNA3Q9UI47 895 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms