RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TEX11Q8IYF3 940 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 MAGEB6Q8N7X4 407 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 EXOC6Q8TAG9 804 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 ZNF341Q9BYN7 854 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 CSADQ9Y600 493 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 ATRNL1Q5VV63 1379 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 MYH7P12883 1935 aa22.45■■□□□ 1.18
CHTOP-202ENST00000368687 ZSCAN29Q8IWY8 852 aaPredicted RBP22.45■■□□□ 1.18
CHTOP-202ENST00000368687 CSRNP1Q96S65 589 aa22.45■■□□□ 1.18
CHTOP-202ENST00000368687 BOLA2Q9H3K6 86 aa22.45■■□□□ 1.18
CHTOP-202ENST00000368687 ANTXR1Q9H6X2 564 aa22.45■■□□□ 1.18
CHTOP-202ENST00000368687 AATFQ9NY61 560 aaKnown RBP eCLIP22.45■■□□□ 1.18
CHTOP-202ENST00000368687 TSKSQ9UJT2 592 aa22.45■■□□□ 1.18
CHTOP-202ENST00000368687 LAMB1P07942 1786 aa22.45■■□□□ 1.18
CHTOP-202ENST00000368687 MAP3K9P80192 1104 aa22.44■■□□□ 1.18
CHTOP-202ENST00000368687 ZSCAN25Q6NSZ9 544 aa22.44■■□□□ 1.18
CHTOP-202ENST00000368687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHTOP-202ENST00000368687 NDUFB9Q9Y6M9 179 aa22.44■■□□□ 1.18
CHTOP-202ENST00000368687 CDK5RAP2Q96SN8 1893 aa22.43■■□□□ 1.18
CHTOP-202ENST00000368687 SREBF2Q12772 1141 aa22.43■■□□□ 1.18
CHTOP-202ENST00000368687 PICALMQ13492 652 aa22.43■■□□□ 1.18
CHTOP-202ENST00000368687 SLC9C2Q5TAH2 1124 aa22.43■■□□□ 1.18
CHTOP-202ENST00000368687 CDAN1Q8IWY9 1227 aa22.43■■□□□ 1.18
CHTOP-202ENST00000368687 DHX36Q9H2U1 1008 aaKnown RBP22.43■■□□□ 1.18
CHTOP-202ENST00000368687 KIF23Q02241 960 aaPredicted RBP22.42■■□□□ 1.18
CHTOP-202ENST00000368687 LRRFIP1Q32MZ4 808 aaKnown RBP22.42■■□□□ 1.18
CHTOP-202ENST00000368687 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
CHTOP-202ENST00000368687 SPRYD7Q5W111 196 aa22.42■■□□□ 1.18
CHTOP-202ENST00000368687 WRNIP1Q96S55 665 aa22.42■■□□□ 1.18
CHTOP-202ENST00000368687 OSBPL5Q9H0X9 879 aaPredicted RBP22.42■■□□□ 1.18
CHTOP-202ENST00000368687 GLRX3O76003 335 aaKnown RBP22.41■■□□□ 1.18
CHTOP-202ENST00000368687 PDE6AP16499 860 aa22.41■■□□□ 1.18
CHTOP-202ENST00000368687 MX1P20591 662 aa22.41■■□□□ 1.18
CHTOP-202ENST00000368687 INHBEP58166 350 aa22.41■■□□□ 1.18
CHTOP-202ENST00000368687 ADGRA1Q86SQ6 560 aa22.41■■□□□ 1.18
CHTOP-202ENST00000368687 SMC5Q8IY18 1101 aa22.41■■□□□ 1.18
CHTOP-202ENST00000368687 SH3RF3Q8TEJ3 882 aaPredicted RBP22.41■■□□□ 1.18
CHTOP-202ENST00000368687 DDX4Q9NQI0 724 aaKnown RBP22.41■■□□□ 1.18
CHTOP-202ENST00000368687 SAGE1Q9NXZ1 904 aa22.41■■□□□ 1.18
CHTOP-202ENST00000368687 MANSC4A6NHS7 340 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-202ENST00000368687 VGLL4Q14135 290 aa22.4■■□□□ 1.18
CHTOP-202ENST00000368687 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-202ENST00000368687 WNK4Q96J92 1243 aa22.4■■□□□ 1.18
CHTOP-202ENST00000368687 ZNF112Q9UJU3 913 aa22.4■■□□□ 1.18
CHTOP-202ENST00000368687 FZD1Q9UP38 647 aa22.4■■□□□ 1.18
CHTOP-202ENST00000368687 TBC1D12O60347 775 aa22.39■■□□□ 1.17
CHTOP-202ENST00000368687 MAP3K10Q02779 954 aa22.39■■□□□ 1.17
CHTOP-202ENST00000368687 CLMNQ96JQ2 1002 aa22.39■■□□□ 1.17
CHTOP-202ENST00000368687 FLT1P17948 1338 aa22.38■■□□□ 1.17
CHTOP-202ENST00000368687 ZNF532Q9HCE3 1301 aa22.38■■□□□ 1.17
CHTOP-202ENST00000368687 MAGEB6P1A0A0J9YX57 407 aa22.38■■□□□ 1.17
CHTOP-202ENST00000368687 UBE3CQ15386 1083 aa22.38■■□□□ 1.17
CHTOP-202ENST00000368687 MIGA2Q7L4E1 593 aa22.38■■□□□ 1.17
CHTOP-202ENST00000368687 ZFPM1Q8IX07 1006 aa22.38■■□□□ 1.17
CHTOP-202ENST00000368687 PI4KBQ9UBF8 816 aa22.38■■□□□ 1.17
CHTOP-202ENST00000368687 HERC5Q9UII4 1024 aaKnown RBP22.38■■□□□ 1.17
CHTOP-202ENST00000368687 DDTLA6NHG4 134 aaPredicted RBP22.37■■□□□ 1.17
CHTOP-202ENST00000368687 ZFYP08048 801 aaPredicted RBP22.37■■□□□ 1.17
CHTOP-202ENST00000368687 ADD2P35612 726 aa22.37■■□□□ 1.17
CHTOP-202ENST00000368687 TM4SF4P48230 202 aa22.37■■□□□ 1.17
CHTOP-202ENST00000368687 NOL9Q5SY16 702 aaKnown RBP22.37■■□□□ 1.17
CHTOP-202ENST00000368687 ERO1BQ86YB8 467 aa22.37■■□□□ 1.17
CHTOP-202ENST00000368687 MIGA1Q8NAN2 632 aa22.37■■□□□ 1.17
CHTOP-202ENST00000368687 TGFBRAP1Q8WUH2 860 aa22.37■■□□□ 1.17
CHTOP-202ENST00000368687 CRNKL1Q9BZJ0 848 aaKnown RBP22.37■■□□□ 1.17
CHTOP-202ENST00000368687 MYH1P12882 1939 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 TCRBV5S4A2TA0A5A2 114 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 SPDYE5A6NIY4 337 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 ALDH1A1P00352 501 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 HLA-DOAP06340 250 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 USP5P45974 858 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 SH3BP5LQ7L8J4 393 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 KBTBD3Q8NAB2 608 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 OPTNQ96CV9 577 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 EDC3Q96F86 508 aaKnown RBP22.36■■□□□ 1.17
CHTOP-202ENST00000368687 ELP3Q9H9T3 547 aa22.36■■□□□ 1.17
CHTOP-202ENST00000368687 OTUD7BQ6GQQ9 843 aa22.35■■□□□ 1.17
CHTOP-202ENST00000368687 RIOK1Q9BRS2 568 aaKnown RBP22.35■■□□□ 1.17
CHTOP-202ENST00000368687 STAP2Q9UGK3 403 aa22.35■■□□□ 1.17
CHTOP-202ENST00000368687 SNCAIPQ9Y6H5 919 aa22.35■■□□□ 1.17
CHTOP-202ENST00000368687 SALL3Q9BXA9 1300 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 CTNND1O60716 968 aaKnown RBP22.34■■□□□ 1.17
CHTOP-202ENST00000368687 CAPN15O75808 1086 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 GTF2A2P52657 109 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 DYNLL1P63167 89 aaKnown RBP22.34■■□□□ 1.17
CHTOP-202ENST00000368687 PPATQ06203 517 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 TICAM2Q86XR7 235 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 MAPKAPK5Q8IW41 473 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 TRIM34Q9BYJ4 488 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 RNF186Q9NXI6 227 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 TAOK2Q9UL54 1235 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 DOCK1Q14185 1865 aa22.34■■□□□ 1.17
CHTOP-202ENST00000368687 NAV1Q8NEY1 1877 aa22.33■■□□□ 1.17
CHTOP-202ENST00000368687 NUCB1Q02818 461 aa22.33■■□□□ 1.17
CHTOP-202ENST00000368687 MKRN3Q13064 507 aaKnown RBP22.33■■□□□ 1.17
CHTOP-202ENST00000368687 PPIL2Q13356 520 aa22.33■■□□□ 1.17
CHTOP-202ENST00000368687 CHD1LQ86WJ1 897 aa22.33■■□□□ 1.17
CHTOP-202ENST00000368687 FOXP4Q8IVH2 680 aaPredicted RBP22.33■■□□□ 1.17
CHTOP-202ENST00000368687 ZKSCAN4Q969J2 545 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms