RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZC3H4Q9UPT8 1303 aaKnown RBP14.6□□□□□ -0.07
TUBE1-202ENST00000368662 USP17L12C9JPN9 530 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 USP17L21D6R901 530 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
TUBE1-202ENST00000368662 ZNF280AP59817 542 aaPredicted RBP14.6□□□□□ -0.07
TUBE1-202ENST00000368662 C9orf131Q5VYM1 1079 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 NCOA7Q8NI08 942 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 IDI2Q9BXS1 227 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 CNNM2Q9H8M5 875 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 TAF6LQ9Y6J9 622 aa14.6□□□□□ -0.07
TUBE1-202ENST00000368662 MINDY4BA8MYZ0 360 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 MYO1BO43795 1136 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 WDHD1O75717 1129 aaPredicted RBP14.59□□□□□ -0.07
TUBE1-202ENST00000368662 MCM2P49736 904 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 NT5C2P49902 561 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 GMPSP49915 693 aaPredicted RBP14.59□□□□□ -0.07
TUBE1-202ENST00000368662 AKNAD1Q5T1N1 836 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 RALYLQ86SE5 291 aaKnown RBP14.59□□□□□ -0.07
TUBE1-202ENST00000368662 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 STAG1Q8WVM7 1258 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
TUBE1-202ENST00000368662 MYOZ2Q9NPC6 264 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 TMOD2Q9NZR1 351 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 MFSD6Q6ZSS7 791 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 KRT23Q9C075 422 aa14.59□□□□□ -0.07
TUBE1-202ENST00000368662 TIAM2Q8IVF5 1701 aa14.58□□□□□ -0.08
TUBE1-202ENST00000368662 C12orf60Q5U649 245 aa14.58□□□□□ -0.08
TUBE1-202ENST00000368662 STOX1Q6ZVD7 989 aa14.58□□□□□ -0.08
TUBE1-202ENST00000368662 PRMT6Q96LA8 375 aaPredicted RBP14.58□□□□□ -0.08
TUBE1-202ENST00000368662 IPO9Q96P70 1041 aaKnown RBP14.58□□□□□ -0.08
TUBE1-202ENST00000368662 ADAMTSL1Q8N6G6 1762 aa14.58□□□□□ -0.08
TUBE1-202ENST00000368662 FOCADQ5VW36 1801 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 POLR3DP05423 398 aaPredicted RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 RPS6KB1P23443 525 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 PICALMQ13492 652 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 TBC1D10CQ8IV04 446 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 MICALL2Q8IY33 904 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 NBPF3Q9H094 633 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 ZNF287Q9HBT7 754 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 CNOT7Q9UIV1 285 aaKnown RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 NAV1Q8NEY1 1877 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 BAZ2AQ9UIF9 1905 aaKnown RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 H7C1D1 291 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 CTDSPL2Q05D32 466 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 PDE4BQ07343 736 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 ANKRD1Q15327 319 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 FKBP1CQ5VVH2 108 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 TTC6Q86TZ1 520 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 ZBED3Q96IU2 234 aaPredicted RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 ALDH8A1Q9H2A2 487 aaPredicted RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 DHX36Q9H2U1 1008 aaKnown RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 TDRD3Q9H7E2 651 aaKnown RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 PDRG1Q9NUG6 133 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 DAXXQ9UER7 740 aaPredicted RBP14.57□□□□□ -0.08
TUBE1-202ENST00000368662 PCDHAC2Q9Y5I4 1007 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 ROBO3Q96MS0 1386 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
TUBE1-202ENST00000368662 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 ENTPD3O75355 529 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 MCM5P33992 734 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 TTC14Q96N46 770 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 TAOK2Q9UL54 1235 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 LAMB1P07942 1786 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 WNT10BO00744 389 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 FGRP09769 529 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 SPDYE2Q495Y8 402 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 DDX4Q9NQI0 724 aaKnown RBP14.56□□□□□ -0.08
TUBE1-202ENST00000368662 GPRC5DQ9NZD1 345 aa14.56□□□□□ -0.08
TUBE1-202ENST00000368662 DDX60LQ5H9U9 1706 aaKnown RBP14.56□□□□□ -0.08
TUBE1-202ENST00000368662 HLA-DOAP06340 250 aa14.55□□□□□ -0.08
TUBE1-202ENST00000368662 NFIAQ12857 509 aa14.55□□□□□ -0.08
TUBE1-202ENST00000368662 MB21D2Q8IYB1 491 aaPredicted RBP14.55□□□□□ -0.08
TUBE1-202ENST00000368662 TBC1D2Q9BYX2 928 aa14.55□□□□□ -0.08
TUBE1-202ENST00000368662 ZNF70Q9UC06 446 aaPredicted RBP14.55□□□□□ -0.08
TUBE1-202ENST00000368662 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
TUBE1-202ENST00000368662 COL2A1P02458 1487 aaPredicted RBP14.55□□□□□ -0.08
TUBE1-202ENST00000368662 CYP2D7A0A087X1C5 515 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 ORC4O43929 436 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 LMOD1P29536 600 aaPredicted RBP14.54□□□□□ -0.08
TUBE1-202ENST00000368662 EXOSC10Q01780 885 aaKnown RBP14.54□□□□□ -0.08
TUBE1-202ENST00000368662 FBXL16Q8N461 479 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 ESR2Q92731 530 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 TOMM22Q9NS69 142 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 NEDD4P46934 1319 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 K7ELQ4 463 aaPredicted RBP14.54□□□□□ -0.08
TUBE1-202ENST00000368662 CPA1P15085 419 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 FGD1P98174 961 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 MTA3Q9BTC8 594 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 FAM198AQ9UFP1 575 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 MYH1P12882 1939 aa14.54□□□□□ -0.08
TUBE1-202ENST00000368662 CYP2D6P10635 497 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 PLCD1P51178 756 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 CACNB3P54284 484 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 AK2P54819 239 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms