RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 ZNF592Q92610 1267 aa20.93■□□□□ 0.94
UBQLN4-201ENST00000368309 AK7Q96M32 723 aa20.93■□□□□ 0.94
UBQLN4-201ENST00000368309 MYH3P11055 1940 aa20.93■□□□□ 0.94
UBQLN4-201ENST00000368309 SMIM22K7EJ46 135 aa20.93■□□□□ 0.94
UBQLN4-201ENST00000368309 KCNJ14Q9UNX9 436 aa20.93■□□□□ 0.94
UBQLN4-201ENST00000368309 SPECC1Q5M775 1068 aa20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 NBPF11Q86T75 865 aa20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 MAP3K14Q99558 947 aa20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 TRMT1Q9NXH9 659 aaKnown RBP20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 IFNKQ9P0W0 207 aa20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 BTBD18B2RXH4 712 aa20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 NLRP12P59046 1061 aa20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 NACAP1Q9BZK3 213 aa20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 XPO4Q9C0E2 1151 aaKnown RBP20.92■□□□□ 0.94
UBQLN4-201ENST00000368309 U2AF2P26368 475 aaKnown RBP eCLIP20.92■□□□□ 0.948e-9■■■□□ 15.1
UBQLN4-201ENST00000368309 MINDY4BA8MYZ0 360 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 SDR42E1Q8WUS8 393 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 KRT23Q9C075 422 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 CNNM2Q9H8M5 875 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 LMOD1P29536 600 aaPredicted RBP20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 PNOCQ13519 176 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 MTERF4Q7Z6M4 381 aaKnown RBP20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 ADGRA1Q86SQ6 560 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 NUP133Q8WUM0 1156 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 NTSR2O95665 410 aa20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 MARCH10Q8NA82 808 aaPredicted RBP20.91■□□□□ 0.94
UBQLN4-201ENST00000368309 CYP7A1P22680 504 aa20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 WTAPQ15007 396 aa20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 JMYQ8N9B5 988 aa20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 PPP6R2O75170 966 aa20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 GYG1P46976 350 aa20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 CCZ1BP86790 482 aa20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 CCZ1P86791 482 aaPredicted RBP20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 PARP10Q53GL7 1025 aa20.9■□□□□ 0.94
UBQLN4-201ENST00000368309 FMNL1O95466 1100 aaPredicted RBP20.89■□□□□ 0.94
UBQLN4-201ENST00000368309 NCAPHQ15003 741 aa20.89■□□□□ 0.94
UBQLN4-201ENST00000368309 HPSEQ9Y251 543 aa20.89■□□□□ 0.94
UBQLN4-201ENST00000368309 NHSL1Q5SYE7 1610 aa20.89■□□□□ 0.94
UBQLN4-201ENST00000368309 C4AP0C0L4 1744 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 C4BP0C0L5 1744 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 KCNQ4P56696 695 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 RTN1Q16799 776 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 LONRF3Q496Y0 759 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 RAI14Q9P0K7 980 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 NEMFO60524 1076 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 IFNAR1P17181 557 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 ATP2B1P20020 1258 aa20.89■□□□□ 0.93
UBQLN4-201ENST00000368309 ATP1A3P13637 1013 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 SART3Q15020 963 aaKnown RBP20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 SMIM5Q71RC9 77 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 TMC6Q7Z403 805 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 DIS3L2Q8IYB7 885 aaKnown RBP20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 STAG1Q8WVM7 1258 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 BPIFA3Q9BQP9 254 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 ANKRD36CQ5JPF3 1778 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 ERICH2A1L162 156 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 KCNQ2O43526 872 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 NOSTRINQ8IVI9 506 aa20.88■□□□□ 0.93
UBQLN4-201ENST00000368309 GNAT2P19087 354 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 RESP18Q5W5W9 173 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 GRIN1Q05586 938 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 NR5A1Q13285 461 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 CEP135Q66GS9 1140 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 FOXP4Q8IVH2 680 aaPredicted RBP20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 TRIM22Q8IYM9 498 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 KCNH3Q9ULD8 1083 aa20.87■□□□□ 0.93
UBQLN4-201ENST00000368309 TOB1P50616 345 aaPredicted RBP20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 PPARAQ07869 468 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 BICDL1Q6ZP65 573 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 TIGD1Q96MW7 591 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 PNPLA7Q6ZV29 1317 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 FOXN1O15353 648 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 SAFBQ15424 915 aaKnown RBP eCLIP20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 CNNM3Q8NE01 707 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 SMTNL1A8MU46 457 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 MMP1P03956 469 aa20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 DDX60Q8IY21 1712 aaKnown RBP20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.86■□□□□ 0.93
UBQLN4-201ENST00000368309 NAA30Q147X3 362 aaPredicted RBP20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 METTL16Q86W50 562 aaKnown RBP20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 FANCBQ8NB91 859 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 RGS22Q8NE09 1264 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 UBAC1Q9BSL1 405 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 TUBE1Q9UJT0 475 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 SPATA31A1Q5TZJ5 1347 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 CYP2D7A0A087X1C5 515 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 TPM4P67936 248 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 PTPN14Q15678 1187 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 ERFEQ4G0M1 354 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 CRACR2BQ8N4Y2 399 aaPredicted RBP20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 WASF1Q92558 559 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 NUTM2BA6NNL0 878 aaPredicted RBP20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 NUTM2EB1AL46 878 aaPredicted RBP20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 CTIFO43310 598 aaKnown RBP20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 CUTAO60888 179 aa20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 NUTM2AQ8IVF1 878 aaPredicted RBP20.85■□□□□ 0.93
UBQLN4-201ENST00000368309 ZNF654Q8IZM8 581 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms