RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 FYB2Q5VWT5 728 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 ASB11Q8WXH4 323 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 FANCD2OSQ96PS1 177 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 TCF12Q99081 682 aa6.66□□□□□ -1.34
ECHDC1-201ENST00000368287 A0A1W2PP55 124 aa6.65□□□□□ -1.34
ECHDC1-201ENST00000368287 RNGTTO60942 597 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-201ENST00000368287 SLFN14P0C7P3 912 aa6.65□□□□□ -1.34
ECHDC1-201ENST00000368287 LIG1P18858 919 aa6.65□□□□□ -1.34
ECHDC1-201ENST00000368287 CTSWP56202 376 aa6.65□□□□□ -1.34
ECHDC1-201ENST00000368287 TNKS2Q9H2K2 1166 aa6.65□□□□□ -1.34
ECHDC1-201ENST00000368287 SLAIN2Q9P270 581 aa6.65□□□□□ -1.34
ECHDC1-201ENST00000368287 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-201ENST00000368287 NPIPB6E9PJ23 425 aa6.64□□□□□ -1.35
ECHDC1-201ENST00000368287 AMIGO3Q86WK7 504 aa6.64□□□□□ -1.35
ECHDC1-201ENST00000368287 TOP6BLQ8N6T0 577 aa6.64□□□□□ -1.35
ECHDC1-201ENST00000368287 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-201ENST00000368287 KIRREL1Q96J84 757 aa6.64□□□□□ -1.35
ECHDC1-201ENST00000368287 KRT1P04264 644 aa6.63□□□□□ -1.35
ECHDC1-201ENST00000368287 TTLL4Q14679 1199 aa6.63□□□□□ -1.35
ECHDC1-201ENST00000368287 TMEM67Q5HYA8 995 aa6.63□□□□□ -1.35
ECHDC1-201ENST00000368287 WDR89Q96FK6 387 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-201ENST00000368287 ZNF576Q9H609 170 aa6.63□□□□□ -1.35
ECHDC1-201ENST00000368287 PCOLCE2Q9UKZ9 415 aa6.63□□□□□ -1.35
ECHDC1-201ENST00000368287 HCLS1P14317 486 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-201ENST00000368287 HNRNPUQ00839 825 aaKnown RBP eCLIP6.62□□□□□ -1.35
ECHDC1-201ENST00000368287 CCDC86Q9H6F5 360 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-201ENST00000368287 DISC1Q9NRI5 854 aa6.62□□□□□ -1.35
ECHDC1-201ENST00000368287 JAG2Q9Y219 1238 aa6.62□□□□□ -1.35
ECHDC1-201ENST00000368287 PPP1R15AO75807 674 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 TMEM253P0C7T8 217 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 CIAPIN1Q6FI81 312 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 CYFIP1Q7L576 1253 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 HOMEZQ8IX15 550 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 GALNT12Q8IXK2 581 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 GTF3C2Q8WUA4 911 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 PBXIP1Q96AQ6 731 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 ZC3H12CQ9C0D7 883 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 NSUN3Q9H649 340 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 SSU72Q9NP77 194 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-201ENST00000368287 SRPK2P78362 688 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-201ENST00000368287 MTMR3Q13615 1198 aa6.6□□□□□ -1.35
ECHDC1-201ENST00000368287 KCNA10Q16322 511 aa6.6□□□□□ -1.35
ECHDC1-201ENST00000368287 GTF2IRD1Q9UHL9 959 aa6.6□□□□□ -1.35
ECHDC1-201ENST00000368287 ZNF862O60290 1169 aa6.59□□□□□ -1.35
ECHDC1-201ENST00000368287 ITPKAP23677 461 aa6.59□□□□□ -1.35
ECHDC1-201ENST00000368287 KIF4BQ2VIQ3 1234 aa6.59□□□□□ -1.35
ECHDC1-201ENST00000368287 HEXIM2Q96MH2 286 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-201ENST00000368287 TCAF2A6NFQ2 919 aa6.58□□□□□ -1.36
ECHDC1-201ENST00000368287 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.58□□□□□ -1.36
ECHDC1-201ENST00000368287 SPACA3Q8IXA5 215 aa6.58□□□□□ -1.36
ECHDC1-201ENST00000368287 GJD3Q8N144 294 aa6.58□□□□□ -1.36
ECHDC1-201ENST00000368287 EHD4Q9H223 541 aa6.58□□□□□ -1.36
ECHDC1-201ENST00000368287 CD320Q9NPF0 282 aa6.58□□□□□ -1.36
ECHDC1-201ENST00000368287 PCDHGC5Q9Y5F6 944 aa6.58□□□□□ -1.36
ECHDC1-201ENST00000368287 HOXA5P20719 270 aa6.57□□□□□ -1.36
ECHDC1-201ENST00000368287 KIAA0319Q5VV43 1072 aa6.57□□□□□ -1.36
ECHDC1-201ENST00000368287 ATG14Q6ZNE5 492 aa6.57□□□□□ -1.36
ECHDC1-201ENST00000368287 ISL2Q96A47 359 aa6.57□□□□□ -1.36
ECHDC1-201ENST00000368287 PITPNM2Q9BZ72 1349 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 IGF2BP3O00425 579 aaKnown RBP eCLIP6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 FZD6O60353 706 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 FAM13AO94988 1023 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 NEFMP07197 916 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 CLCN7P51798 805 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 RELTQ969Z4 430 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 EPB41L4BQ9H329 900 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
ECHDC1-201ENST00000368287 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 NUAK1O60285 661 aa6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 GSTP1P09211 210 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 NPR3P17342 541 aa6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 ZNF157P51786 506 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 PTPN12Q05209 780 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 FAM214BQ7L5A3 538 aa6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 C20orf173Q96LM9 149 aa6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 DCP1AQ9NPI6 582 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-201ENST00000368287 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
ECHDC1-201ENST00000368287 GDNFP39905 211 aa6.54□□□□□ -1.36
ECHDC1-201ENST00000368287 CCDC87Q9NVE4 849 aa6.54□□□□□ -1.36
ECHDC1-201ENST00000368287 PDE4CQ08493 712 aa6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 RPS26P11Q5JNZ5 115 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 USPL1Q5W0Q7 1092 aa6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 CSRNP1Q96S65 589 aa6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 KCNK12Q9HB15 430 aa6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 PRDM10Q9NQV6 1147 aa6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 C19orf73Q9NVV2 129 aa6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 SMG5Q9UPR3 1016 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-201ENST00000368287 ETV2O00321 342 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-201ENST00000368287 GLDCP23378 1020 aa6.52□□□□□ -1.37
ECHDC1-201ENST00000368287 LINC00310P59036 64 aa6.52□□□□□ -1.37
ECHDC1-201ENST00000368287 RNF214Q8ND24 703 aa6.52□□□□□ -1.37
ECHDC1-201ENST00000368287 KCNB2Q92953 911 aa6.52□□□□□ -1.37
ECHDC1-201ENST00000368287 FAAP100Q0VG06 881 aa6.51□□□□□ -1.37
ECHDC1-201ENST00000368287 ABCB6Q9NP58 842 aa6.51□□□□□ -1.37
ECHDC1-201ENST00000368287 NPHS2Q9NP85 383 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms