RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 NBPF15Q8N660 670 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
NECTIN4-201ENST00000368012 FMN2Q9NZ56 1722 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 CDC27P30260 824 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 ZNF174Q15697 407 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 BLZF1Q9H2G9 400 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 KIF5CO60282 957 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 TFRCP02786 760 aaKnown RBP12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 MROH7-TTC4A0A0A0MT08 1334 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 N4BP3O15049 544 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 PRKAB2O43741 272 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 ITGA6P23229 1130 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 ST5P78524 1137 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 KRI1Q8N9T8 703 aaKnown RBP12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
NECTIN4-201ENST00000368012 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 CDC25AP30304 524 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 PDE4BQ07343 736 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 SMC1AQ14683 1233 aaKnown RBP12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 CAPN2P17655 700 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 FOXO4P98177 505 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 DRC1Q96MC2 740 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 SLC4A4Q9Y6R1 1079 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 ERBB3P21860 1342 aa12.6□□□□□ -0.39
NECTIN4-201ENST00000368012 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 GUCY1A2P33402 732 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 PHKA1P46020 1223 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 WTAPQ15007 396 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 RTN1Q16799 776 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 BICDL1Q6ZP65 573 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 TBC1D10CQ8IV04 446 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 DNAJC10Q8IXB1 793 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 IGSF22Q8N9C0 903 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 GUCA1BQ9UMX6 200 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 VWA3AA6NCI4 1184 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 APOA5Q6Q788 366 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 GREM2Q9H772 168 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 UTYO14607 1347 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 POSTNQ15063 836 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 ALDH8A1Q9H2A2 487 aaPredicted RBP12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
NECTIN4-201ENST00000368012 UBR1Q8IWV7 1749 aa12.58□□□□□ -0.39
NECTIN4-201ENST00000368012 TRIM66O15016 1216 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 NAP1L1P55209 391 aaKnown RBP12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 ANTXR2P58335 489 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 LEKR1Q6ZMV7 388 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 PCDHB6Q9Y5E3 794 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 CACNA1FO60840 1977 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 RRAGBQ5VZM2 374 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 AK7Q96M32 723 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 PARD6BQ9BYG5 372 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 ARHGAP6O43182 974 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 TEX33O43247 280 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 ZMYND10O75800 440 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 CCDC175P0C221 793 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 DHX37Q8IY37 1157 aaKnown RBP12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 NACAP1Q9BZK3 213 aa12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 OSBPL5Q9H0X9 879 aaPredicted RBP12.58□□□□□ -0.4
NECTIN4-201ENST00000368012 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 SPECC1LQ69YQ0 1117 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 ANKRD20A12PQ8NF67 263 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 SDR42E1Q8WUS8 393 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 SUGCTQ9HAC7 445 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 DACH1Q9UI36 760 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 FAM170AA1A519 330 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 MCAMP43121 646 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 MAP3K12Q12852 859 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 METTL16Q86W50 562 aaKnown RBP12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 GOLGA1Q92805 767 aa12.57□□□□□ -0.4
NECTIN4-201ENST00000368012 EPSTI1Q96J88 318 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms