RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 PDE6BP35913 854 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 ZNF444Q8N0Y2 327 aaPredicted RBP8.28□□□□□ -1.08
VTA1-202ENST00000367630 RNF26Q9BY78 433 aaPredicted RBP8.28□□□□□ -1.08
VTA1-202ENST00000367630 GBP1P32455 592 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 CETN2P41208 172 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 USP5P45974 858 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 CCAR2Q8N163 923 aaKnown RBP8.28□□□□□ -1.08
VTA1-202ENST00000367630 AOPEPQ8N6M6 819 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 USHBP1Q8N6Y0 703 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 RNF14Q9UBS8 474 aa8.28□□□□□ -1.08
VTA1-202ENST00000367630 FOXO3O43524 673 aa8.27□□□□□ -1.08
VTA1-202ENST00000367630 TACC1O75410 805 aa8.27□□□□□ -1.08
VTA1-202ENST00000367630 CETN1Q12798 172 aa8.27□□□□□ -1.08
VTA1-202ENST00000367630 FERMT3Q86UX7 667 aa8.27□□□□□ -1.08
VTA1-202ENST00000367630 LRRC59Q96AG4 307 aaKnown RBP8.27□□□□□ -1.08
VTA1-202ENST00000367630 PLVAPQ9BX97 442 aa8.27□□□□□ -1.08
VTA1-202ENST00000367630 OSBPL5Q9H0X9 879 aaPredicted RBP8.27□□□□□ -1.08
VTA1-202ENST00000367630 DNAJC25Q9H1X3 360 aa8.27□□□□□ -1.08
VTA1-202ENST00000367630 POTEJP0CG39 1038 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 RESTQ13127 1097 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 CNNM4Q6P4Q7 775 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 EXOC1Q9NV70 894 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 ABCD1P33897 745 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 VAV2P52735 878 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 SLC39A14Q15043 492 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 CKAP2LQ8IYA6 745 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 IL6STP40189 918 aaPredicted RBP8.27□□□□□ -1.09
VTA1-202ENST00000367630 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 ARHGAP27Q6ZUM4 889 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 GSDMAQ96QA5 445 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 LONP1P36776 959 aaKnown RBP8.27□□□□□ -1.09
VTA1-202ENST00000367630 DZIP1Q86YF9 867 aaKnown RBP8.27□□□□□ -1.09
VTA1-202ENST00000367630 KIAA1524Q8TCG1 905 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 OTUD7AQ8TE49 926 aaPredicted RBP8.27□□□□□ -1.09
VTA1-202ENST00000367630 XAGE2Q96GT9 111 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 BAG1Q99933 345 aaPredicted RBP8.27□□□□□ -1.09
VTA1-202ENST00000367630 SLC26A6Q9BXS9 759 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 KCNH3Q9ULD8 1083 aa8.27□□□□□ -1.09
VTA1-202ENST00000367630 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 WDR66Q8TBY9 1149 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 NUP133Q8WUM0 1156 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 NAP1L3Q99457 506 aaPredicted RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 PPP1R2P3Q6NXS1 205 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 KDM3AQ9Y4C1 1321 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 SLC9C2Q5TAH2 1124 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 RBM43Q6ZSC3 357 aaKnown RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 CUL5Q93034 780 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 CCDC43Q96MW1 224 aaKnown RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 SELENOOQ9BVL4 669 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 IRS4O14654 1257 aaPredicted RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 ZPR1O75312 459 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 UBA7P41226 1012 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 ARL6IP4Q66PJ3 421 aaKnown RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 DDX46Q7L014 1031 aaKnown RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 FBXO18Q8NFZ0 1043 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 TBC1D22AQ8WUA7 517 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 RUNDC3BQ96NL0 473 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 NUP88Q99567 741 aaPredicted RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 MRVI1Q9Y6F6 885 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 SLC4A4Q9Y6R1 1079 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 PHRF1Q9P1Y6 1649 aaKnown RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 URI1O94763 535 aaPredicted RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 HLA-DOAP06340 250 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 ZC3H6P61129 1189 aaKnown RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 PANX2Q96RD6 677 aa8.26□□□□□ -1.09
VTA1-202ENST00000367630 CTDP1Q9Y5B0 961 aaPredicted RBP8.26□□□□□ -1.09
VTA1-202ENST00000367630 DESP17661 470 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 CTSWP56202 376 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 FANCCQ00597 558 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 CCDC84Q86UT8 332 aaPredicted RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 MED4Q9NPJ6 270 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 GCOM1H8Y6P7 765 aaPredicted RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 MYZAPP0CAP1 466 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 UBE4AQ14139 1066 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 AKNAD1Q5T1N1 836 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 PLA2G4DQ86XP0 818 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 C16orf45Q96MC5 204 aaPredicted RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 C1orf167Q5SNV9 1468 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 CLSTN1O94985 981 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 ZNF202O95125 648 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 STAT6P42226 847 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 CEBPZQ03701 1054 aaKnown RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 RRP12Q5JTH9 1297 aaKnown RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 SPECC1LQ69YQ0 1117 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 NECAB1Q8N987 351 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 MAP3K14Q99558 947 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 TPCN1Q9ULQ1 816 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 CHD2O14647 1828 aaKnown RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 GBP6Q6ZN66 633 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 LRRC8AQ8IWT6 810 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 NFATC2IPQ8NCF5 419 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 SLC17A8Q8NDX2 589 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 AK9Q5TCS8 1911 aa8.25□□□□□ -1.09
VTA1-202ENST00000367630 PARP4Q9UKK3 1724 aaKnown RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 KRT18P05783 430 aaKnown RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 NSUN7Q8NE18 718 aaKnown RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 EAF2Q96CJ1 260 aaPredicted RBP8.25□□□□□ -1.09
VTA1-202ENST00000367630 MKNK2Q9HBH9 465 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms