RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 GSG1L2A8MUP6 293 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
VTA1-201ENST00000367621 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
VTA1-201ENST00000367621 KIAA2012Q0VF49 1180 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
VTA1-201ENST00000367621 NAA16Q6N069 864 aaPredicted RBP11.34□□□□□ -0.59
VTA1-201ENST00000367621 TMED8Q6PL24 325 aaPredicted RBP11.34□□□□□ -0.59
VTA1-201ENST00000367621 CERS5Q8N5B7 392 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 MIGA1Q8NAN2 632 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 PSMD1Q99460 953 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 UPF3BQ9BZI7 483 aaKnown RBP11.34□□□□□ -0.59
VTA1-201ENST00000367621 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
VTA1-201ENST00000367621 PIM2Q9P1W9 311 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 KIF13BQ9NQT8 1826 aa11.34□□□□□ -0.59
VTA1-201ENST00000367621 AK9Q5TCS8 1911 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
VTA1-201ENST00000367621 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
VTA1-201ENST00000367621 CPA1P15085 419 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 NEK4P51957 841 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 GTF2IP78347 998 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 PODNQ7Z5L7 613 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 RTKN2Q8IZC4 609 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
VTA1-201ENST00000367621 AIDAQ96BJ3 306 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 CACNA1SQ13698 1873 aa11.33□□□□□ -0.6
VTA1-201ENST00000367621 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 PPP4CP60510 307 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 BECN1Q14457 450 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 AOC3Q16853 763 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
VTA1-201ENST00000367621 MFSD14BQ5SR56 506 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 NLGN2Q8NFZ4 835 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 JAKMIP1Q96N16 626 aaKnown RBP11.32□□□□□ -0.6
VTA1-201ENST00000367621 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 TACC3Q9Y6A5 838 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 ZMYM6O95789 1325 aa11.32□□□□□ -0.6
VTA1-201ENST00000367621 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 ECE2O60344 883 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 ZKSCAN1P17029 563 aaPredicted RBP11.31□□□□□ -0.6
VTA1-201ENST00000367621 GNAT2P19087 354 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 DACT2Q5SW24 774 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 SUPT20HQ8NEM7 779 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 SPON1Q9HCB6 807 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 GAKO14976 1311 aa11.31□□□□□ -0.6
VTA1-201ENST00000367621 COL4A5P29400 1685 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 GPR75-ASB3A0A0A6YYF3 556 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 E7EWF7 191 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 NFKBIEO00221 500 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 FOSBP53539 338 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 KRT32Q14532 448 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 HSCBQ8IWL3 235 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 ZNF277Q9NRM2 450 aaPredicted RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 AATFQ9NY61 560 aaKnown RBP eCLIP11.3□□□□□ -0.6
VTA1-201ENST00000367621 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 MKRN1Q9UHC7 482 aaKnown RBP11.3□□□□□ -0.6
VTA1-201ENST00000367621 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 MROH7-TTC4A0A0A0MT08 1334 aa11.3□□□□□ -0.6
VTA1-201ENST00000367621 SMIM22K7EJ46 135 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 RPS6KB1P23443 525 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 PSMA5P28066 241 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 PRELPP51888 382 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 HAND2P61296 217 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 GSTO1P78417 241 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 SOGA3Q5TF21 947 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 SDR42E1Q8WUS8 393 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 CYP46A1Q9Y6A2 500 aa11.29□□□□□ -0.6
VTA1-201ENST00000367621 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
VTA1-201ENST00000367621 USP17L3A6NCW0 530 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 USP17L4A6NCW7 530 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 APPP05067 770 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 LDHCP07864 332 aa11.28□□□□□ -0.6
VTA1-201ENST00000367621 DDIT3P35638 169 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms