RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 RAB11FIP3O75154 756 aa17.91■□□□□ 0.46
SF3B5-201ENST00000367569 MAP3K9P80192 1104 aa17.91■□□□□ 0.46
SF3B5-201ENST00000367569 CRHR2Q13324 411 aa17.91■□□□□ 0.46
SF3B5-201ENST00000367569 TSHZ3Q63HK5 1081 aa17.91■□□□□ 0.46
SF3B5-201ENST00000367569 SPTY2D1Q68D10 685 aaPredicted RBP17.91■□□□□ 0.46
SF3B5-201ENST00000367569 NSUN4Q96CB9 384 aaKnown RBP17.91■□□□□ 0.46
SF3B5-201ENST00000367569 EDC3Q96F86 508 aaKnown RBP17.91■□□□□ 0.46
SF3B5-201ENST00000367569 DNAJC2Q99543 621 aaKnown RBP17.91■□□□□ 0.46
SF3B5-201ENST00000367569 USP40Q9NVE5 1235 aa17.91■□□□□ 0.46
SF3B5-201ENST00000367569 PICALMQ13492 652 aa17.9■□□□□ 0.46
SF3B5-201ENST00000367569 VGLL4Q14135 290 aa17.9■□□□□ 0.46
SF3B5-201ENST00000367569 ADGRA1Q86SQ6 560 aa17.9■□□□□ 0.46
SF3B5-201ENST00000367569 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.463e-9■■□□□ 13.6
SF3B5-201ENST00000367569 MS4A4AQ96JQ5 239 aa17.9■□□□□ 0.46
SF3B5-201ENST00000367569 RFX7Q2KHR2 1363 aa17.9■□□□□ 0.46
SF3B5-201ENST00000367569 SIPA1L1O43166 1804 aa17.89■□□□□ 0.45
SF3B5-201ENST00000367569 NAV1Q8NEY1 1877 aa17.89■□□□□ 0.45
SF3B5-201ENST00000367569 IDH1O75874 414 aaKnown RBP17.89■□□□□ 0.45
SF3B5-201ENST00000367569 OTUD7BQ6GQQ9 843 aa17.89■□□□□ 0.45
SF3B5-201ENST00000367569 TRIM17Q9Y577 477 aa17.89■□□□□ 0.45
SF3B5-201ENST00000367569 NAA16Q6N069 864 aaPredicted RBP17.88■□□□□ 0.45
SF3B5-201ENST00000367569 OTOP1Q7RTM1 612 aa17.88■□□□□ 0.45
SF3B5-201ENST00000367569 FAM83AQ86UY5 434 aa17.88■□□□□ 0.45
SF3B5-201ENST00000367569 ZFPM1Q8IX07 1006 aa17.88■□□□□ 0.45
SF3B5-201ENST00000367569 BRI3BPQ8WY22 251 aa17.88■□□□□ 0.45
SF3B5-201ENST00000367569 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
SF3B5-201ENST00000367569 DCTPP1Q9H773 170 aa17.88■□□□□ 0.45
SF3B5-201ENST00000367569 FAM198AQ9UFP1 575 aa17.88■□□□□ 0.45
SF3B5-201ENST00000367569 GOLIM4O00461 696 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 ZBTB22O15209 634 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 SLURP2P0DP57 97 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 RGS3P49796 1198 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 FKBP1CQ5VVH2 108 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 CD99L2Q8TCZ2 262 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 OTUD7AQ8TE49 926 aaPredicted RBP17.87■□□□□ 0.45
SF3B5-201ENST00000367569 OTUD5Q96G74 571 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 BOLA2Q9H3K6 86 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 DDX4Q9NQI0 724 aaKnown RBP17.87■□□□□ 0.45
SF3B5-201ENST00000367569 CSADQ9Y600 493 aa17.87■□□□□ 0.45
SF3B5-201ENST00000367569 HTTP42858 3142 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 CCL15-CCL14A0A0B4J2E2 113 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 CAP1Q01518 475 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 CCL15Q16663 113 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 SH3RF3Q8TEJ3 882 aaPredicted RBP17.86■□□□□ 0.45
SF3B5-201ENST00000367569 ZKSCAN4Q969J2 545 aaPredicted RBP17.86■□□□□ 0.45
SF3B5-201ENST00000367569 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 AATFQ9NY61 560 aaKnown RBP eCLIP17.86■□□□□ 0.45
SF3B5-201ENST00000367569 SNCAIPQ9Y6H5 919 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 ATAD5Q96QE3 1844 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 MYH1P12882 1939 aa17.86■□□□□ 0.45
SF3B5-201ENST00000367569 SPDYE5A6NIY4 337 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 WDHD1O75717 1129 aaPredicted RBP17.85■□□□□ 0.45
SF3B5-201ENST00000367569 GTF2A2P52657 109 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 DYNLL1P63167 89 aaKnown RBP17.85■□□□□ 0.45
SF3B5-201ENST00000367569 GSTO1P78417 241 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 SP3Q02447 781 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 SLFNL1Q499Z3 407 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 MIGA2Q7L4E1 593 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 SLF2Q8IX21 1173 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 FAM43AQ8N2R8 423 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 MAGEB6Q8N7X4 407 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 MIGA1Q8NAN2 632 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 WRNIP1Q96S55 665 aa17.85■□□□□ 0.45
SF3B5-201ENST00000367569 RPAP1Q9BWH6 1393 aaPredicted RBP17.85■□□□□ 0.45
SF3B5-201ENST00000367569 DOCK1Q14185 1865 aa17.84■□□□□ 0.45
SF3B5-201ENST00000367569 DDX60LQ5H9U9 1706 aaKnown RBP17.84■□□□□ 0.45
SF3B5-201ENST00000367569 GPR75-ASB3A0A0A6YYF3 556 aa17.84■□□□□ 0.45
SF3B5-201ENST00000367569 CHGBP05060 677 aa17.84■□□□□ 0.45
SF3B5-201ENST00000367569 CYP7A1P22680 504 aa17.84■□□□□ 0.45
SF3B5-201ENST00000367569 RHBDL3P58872 404 aa17.84■□□□□ 0.45
SF3B5-201ENST00000367569 SLC4A8Q2Y0W8 1093 aa17.84■□□□□ 0.45
SF3B5-201ENST00000367569 PTPN22Q9Y2R2 807 aa17.84■□□□□ 0.45
SF3B5-201ENST00000367569 CENPFP49454 3210 aa17.83■□□□□ 0.44
SF3B5-201ENST00000367569 TAF1CQ15572 869 aaPredicted RBP17.83■□□□□ 0.44
SF3B5-201ENST00000367569 SH3BP5LQ7L8J4 393 aa17.83■□□□□ 0.44
SF3B5-201ENST00000367569 ERO1BQ86YB8 467 aa17.83■□□□□ 0.44
SF3B5-201ENST00000367569 ZSCAN29Q8IWY8 852 aaPredicted RBP17.83■□□□□ 0.44
SF3B5-201ENST00000367569 TEX11Q8IYF3 940 aa17.83■□□□□ 0.44
SF3B5-201ENST00000367569 FAM151AQ8WW52 585 aa17.83■□□□□ 0.44
SF3B5-201ENST00000367569 HOOK2Q96ED9 719 aa17.83■□□□□ 0.44
SF3B5-201ENST00000367569 EFCC1Q9HA90 598 aa17.83■□□□□ 0.44
SF3B5-201ENST00000367569 FAM196BA6NMK8 535 aa17.82■□□□□ 0.44
SF3B5-201ENST00000367569 IRF6O14896 467 aa17.82■□□□□ 0.44
SF3B5-201ENST00000367569 MAP4K4O95819 1239 aaPredicted RBP17.82■□□□□ 0.44
SF3B5-201ENST00000367569 LDHCP07864 332 aa17.82■□□□□ 0.44
SF3B5-201ENST00000367569 DCAF15Q66K64 600 aa17.82■□□□□ 0.44
SF3B5-201ENST00000367569 NOL10Q9BSC4 688 aaKnown RBP17.82■□□□□ 0.44
SF3B5-201ENST00000367569 ZNF341Q9BYN7 854 aa17.82■□□□□ 0.44
SF3B5-201ENST00000367569 ZFYVE28Q9HCC9 887 aa17.82■□□□□ 0.44
SF3B5-201ENST00000367569 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
SF3B5-201ENST00000367569 DDTLA6NHG4 134 aaPredicted RBP17.81■□□□□ 0.44
SF3B5-201ENST00000367569 SLC34A2O95436 690 aa17.81■□□□□ 0.44
SF3B5-201ENST00000367569 INPP5BP32019 993 aa17.81■□□□□ 0.44
SF3B5-201ENST00000367569 B4GALNT3Q6L9W6 998 aa17.81■□□□□ 0.44
SF3B5-201ENST00000367569 MAPKAPK5Q8IW41 473 aa17.81■□□□□ 0.44
SF3B5-201ENST00000367569 FAM163AQ96GL9 167 aaPredicted RBP17.81■□□□□ 0.44
SF3B5-201ENST00000367569 KIAA0100Q14667 2235 aaKnown RBP17.81■□□□□ 0.44
SF3B5-201ENST00000367569 ATRNL1Q5VV63 1379 aa17.8■□□□□ 0.44
SF3B5-201ENST00000367569 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
SF3B5-201ENST00000367569 CETPP11597 493 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms