RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.41
NEK2-201ENST00000366998 KIF3AQ9Y496 699 aa17.58■□□□□ 0.41
NEK2-201ENST00000366998 USP17L12C9JPN9 530 aa17.58■□□□□ 0.4
NEK2-201ENST00000366998 USP17L21D6R901 530 aa17.58■□□□□ 0.4
NEK2-201ENST00000366998 BAG3O95817 575 aa17.58■□□□□ 0.4
NEK2-201ENST00000366998 GTF2IP78347 998 aa17.58■□□□□ 0.4
NEK2-201ENST00000366998 CTR9Q6PD62 1173 aa17.58■□□□□ 0.4
NEK2-201ENST00000366998 NAV1Q8NEY1 1877 aa17.58■□□□□ 0.4
NEK2-201ENST00000366998 MROH7-TTC4A0A0A0MT08 1334 aa17.58■□□□□ 0.4
NEK2-201ENST00000366998 H3BQV1 296 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 DHX16O60231 1041 aaKnown RBP17.57■□□□□ 0.4
NEK2-201ENST00000366998 USP5P45974 858 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
NEK2-201ENST00000366998 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 IGDCC4Q8TDY8 1250 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 EYA3Q99504 573 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 LY9Q9HBG7 655 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
NEK2-201ENST00000366998 SMIM22K7EJ46 135 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 CPLX1O14810 134 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 NCLP19338 710 aaKnown RBP17.56■□□□□ 0.4
NEK2-201ENST00000366998 FOSBP53539 338 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 DOK7Q18PE1 504 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 FERMT3Q86UX7 667 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 SH3RF3Q8TEJ3 882 aaPredicted RBP17.56■□□□□ 0.4
NEK2-201ENST00000366998 ESR2Q92731 530 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 CNKSR1Q969H4 720 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 SENP2Q9HC62 589 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 CDK5RAP2Q96SN8 1893 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 ERICH2A1L162 156 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
NEK2-201ENST00000366998 KLHL40Q2TBA0 621 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 APOA5Q6Q788 366 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 GDPD2Q9HCC8 539 aa17.56■□□□□ 0.4
NEK2-201ENST00000366998 ARPP21Q9UBL0 812 aaPredicted RBP17.56■□□□□ 0.4
NEK2-201ENST00000366998 LIFRP42702 1097 aa17.55■□□□□ 0.4
NEK2-201ENST00000366998 WTAPQ15007 396 aa17.55■□□□□ 0.4
NEK2-201ENST00000366998 MICU3Q86XE3 530 aa17.55■□□□□ 0.4
NEK2-201ENST00000366998 SLF2Q8IX21 1173 aa17.55■□□□□ 0.4
NEK2-201ENST00000366998 UBAC1Q9BSL1 405 aa17.55■□□□□ 0.4
NEK2-201ENST00000366998 RTFDC1Q9BY42 306 aaPredicted RBP17.55■□□□□ 0.4
NEK2-201ENST00000366998 MCM9Q9NXL9 1143 aa17.55■□□□□ 0.4
NEK2-201ENST00000366998 CNPY2Q9Y2B0 182 aa17.55■□□□□ 0.4
NEK2-201ENST00000366998 ZBTB43O43298 467 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 SLC3A2P08195 630 aaKnown RBP17.54■□□□□ 0.4
NEK2-201ENST00000366998 RXRAP19793 462 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 BTDP43251 543 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 PPP4CP60510 307 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 SGMS1Q86VZ5 419 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 PRDM1O75626 825 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 CYP2D6P10635 497 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 SYNE3Q6ZMZ3 975 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
NEK2-201ENST00000366998 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
NEK2-201ENST00000366998 USP17L8P0C7I0 530 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 PCP11498 1178 aaKnown RBP17.53■□□□□ 0.4
NEK2-201ENST00000366998 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
NEK2-201ENST00000366998 SLC4A8Q2Y0W8 1093 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 SBK1Q52WX2 424 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 CERS3Q8IU89 383 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 CCDC144CPQ8IYA2 1237 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 TGFBRAP1Q8WUH2 860 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 MTA3Q9BTC8 594 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
NEK2-201ENST00000366998 FIBPO43427 364 aa17.52■□□□□ 0.4
NEK2-201ENST00000366998 EVX2Q03828 476 aa17.52■□□□□ 0.4
NEK2-201ENST00000366998 USP48Q86UV5 1035 aa17.52■□□□□ 0.4
NEK2-201ENST00000366998 AMOTL1Q8IY63 956 aa17.52■□□□□ 0.4
NEK2-201ENST00000366998 GPR75-ASB3A0A0A6YYF3 556 aa17.52■□□□□ 0.39
NEK2-201ENST00000366998 F8W031 263 aaPredicted RBP17.52■□□□□ 0.39
NEK2-201ENST00000366998 PLCG2P16885 1265 aa17.52■□□□□ 0.39
NEK2-201ENST00000366998 CPLX2Q6PUV4 134 aaKnown RBP17.52■□□□□ 0.39
NEK2-201ENST00000366998 TEX11Q8IYF3 940 aa17.52■□□□□ 0.39
NEK2-201ENST00000366998 DBNDD1Q9H9R9 158 aa17.52■□□□□ 0.39
NEK2-201ENST00000366998 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.39
NEK2-201ENST00000366998 MYH15Q9Y2K3 1946 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 TNKSO95271 1327 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 CDKL5O76039 1030 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 ADD1P35611 737 aaKnown RBP17.51■□□□□ 0.39
NEK2-201ENST00000366998 PDE4BQ07343 736 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 MAPKAPK5Q8IW41 473 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 GPT2Q8TD30 523 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
NEK2-201ENST00000366998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
NEK2-201ENST00000366998 MBD3O95983 291 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 FGRP09769 529 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 FDPSP14324 419 aaKnown RBP17.5■□□□□ 0.39
NEK2-201ENST00000366998 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 CAVIN1Q6NZI2 390 aaKnown RBP17.5■□□□□ 0.39
NEK2-201ENST00000366998 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
NEK2-201ENST00000366998 TMEM87AQ8NBN3 555 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms