RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 CDK8P49336 464 aa5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 HNRNPUQ00839 825 aaKnown RBP eCLIP5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 INPP5AQ14642 412 aa5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 TTLL4Q14679 1199 aa5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 SCARA3Q6AZY7 606 aa5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 PHC3Q8NDX5 983 aa5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 BACH2Q9BYV9 841 aa5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 ATXN3LQ9H3M9 355 aa5.55□□□□□ -1.52
RNU4-48P-201ENST00000365559 DYNC1LI2O43237 492 aaPredicted RBP5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 IGLV1-40P01703 118 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 NEFMP07197 916 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 RLBP1P12271 317 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 HCLS1P14317 486 aaPredicted RBP5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 ERVK-24P63145 666 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 NFIAQ12857 509 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 NFKBIBQ15653 356 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 PPM1JQ5JR12 505 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 RNF43Q68DV7 783 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 LRFN4Q6PJG9 635 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 C12orf40Q86WS4 652 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 SHISA5Q8N114 240 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 BCL11AQ9H165 835 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 LGR6Q9HBX8 967 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 COPRSQ9NQ92 184 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 DAGLAQ9Y4D2 1042 aa5.54□□□□□ -1.52
RNU4-48P-201ENST00000365559 LMNB1P20700 586 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 RING1Q06587 406 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 TSNAXIP1Q2TAA8 658 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 PAOXQ6QHF9 649 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 ERMP1Q7Z2K6 904 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 TMEM87AQ8NBN3 555 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 PLPPR2Q96GM1 343 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 MFSD14AQ96MC6 490 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 TMEM74Q96NL1 305 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 RSRP1Q9BUV0 290 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 YIPF2Q9BWQ6 316 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 MIR1-1HGQ9H1L0 117 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 PIDD1Q9HB75 910 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 KBTBD4Q9NVX7 518 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 KIAA1522Q9P206 1035 aaPredicted RBP5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 PRKAG2Q9UGJ0 569 aa5.53□□□□□ -1.52
RNU4-48P-201ENST00000365559 MINDY4BA8MYZ0 360 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 RNGTTO60942 597 aaKnown RBP5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 RECKO95980 971 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 PF4P02776 101 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 GBP2P32456 591 aaPredicted RBP5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 NTF4P34130 210 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 ADMP35318 185 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 MAP7Q14244 749 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 SEZ6L2Q6UXD5 910 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 SMYD4Q8IYR2 804 aaPredicted RBP5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 FBXL6Q8N531 539 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 RNF214Q8ND24 703 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 JARID2Q92833 1246 aaPredicted RBP5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 ISL2Q96A47 359 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZNF428Q96B54 188 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 ELMO3Q96BJ8 720 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 MRRFQ96E11 262 aaKnown RBP5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 RHOVQ96L33 236 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 DBNDD2Q9BQY9 259 aa5.52□□□□□ -1.53
RNU4-48P-201ENST00000365559 GSC2O15499 205 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 VAMP1P23763 118 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 CAMK2GQ13555 558 aaPredicted RBP5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 WIPI1Q5MNZ9 446 aaPredicted RBP5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZBTB37Q5TC79 503 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 BNC2Q6ZN30 1099 aaPredicted RBP5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 CYFIP1Q7L576 1253 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 HDXQ7Z353 690 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 UBE3DQ7Z6J8 389 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZDHHC13Q8IUH4 622 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 RELL1Q8IUW5 271 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 SHKBP1Q8TBC3 707 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 GATA6Q92908 595 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 C1GALT1Q9NS00 363 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 GGT7Q9UJ14 662 aa5.51□□□□□ -1.53
RNU4-48P-201ENST00000365559 PRAMEF27A3QJZ7 478 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 GFRA2O00451 464 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 F13BP05160 661 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 FANCCQ00597 558 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 LMNB2Q03252 620 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 FAM160A1Q05DH4 1040 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 CDK5R2Q13319 367 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 HS2ST1Q7LGA3 356 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZAR1Q86SH2 424 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 SLC51AQ86UW1 340 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 TBC1D32Q96NH3 1257 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 PICK1Q9NRD5 415 aa5.5□□□□□ -1.53
RNU4-48P-201ENST00000365559 FAM221AA4D161 298 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 PRR19A6NJB7 356 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 FAM170BA6NMN3 283 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 WDR64B1ANS9 1081 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 FANCGO15287 622 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 F13A1P00488 732 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 GARTP22102 1010 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 ZNF76P36508 570 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 PWP1Q13610 501 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 SSU72Q9NP77 194 aaKnown RBP5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 PCOLCE2Q9UKZ9 415 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 SNCAIPQ9Y6H5 919 aa5.49□□□□□ -1.53
RNU4-48P-201ENST00000365559 CILPO75339 1184 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms