RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 NOL3O60936 208 aaKnown RBP22.72■■□□□ 1.23
SMURF1-202ENST00000361368 IFT81Q8WYA0 676 aa22.72■■□□□ 1.23
SMURF1-202ENST00000361368 ZNF408Q9H9D4 720 aa22.72■■□□□ 1.23
SMURF1-202ENST00000361368 PRDM10Q9NQV6 1147 aa22.72■■□□□ 1.23
SMURF1-202ENST00000361368 VAMP4O75379 141 aa22.72■■□□□ 1.23
SMURF1-202ENST00000361368 METTL22Q9BUU2 404 aaPredicted RBP22.72■■□□□ 1.23
SMURF1-202ENST00000361368 CCDC87Q9NVE4 849 aa22.72■■□□□ 1.23
SMURF1-202ENST00000361368 NKIRAS1Q9NYS0 192 aa22.72■■□□□ 1.23
SMURF1-202ENST00000361368 SAMD15Q9P1V8 674 aa22.72■■□□□ 1.23
SMURF1-202ENST00000361368 CETN3O15182 167 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 ZKSCAN3Q9BRR0 538 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 A0A1B0GUL7 405 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 AKR1B15C9JRZ8 316 aaPredicted RBP22.71■■□□□ 1.23
SMURF1-202ENST00000361368 RXRAP19793 462 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 HACE1Q8IYU2 909 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 FAM184BQ9ULE4 1060 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 HOXB7P09629 217 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 TCIRG1Q13488 830 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 CPLX4Q7Z7G2 160 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 CCDC125Q86Z20 511 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 IFNKQ9P0W0 207 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 STIM2Q9P246 746 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 CHMLP26374 656 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 MNAT1P51948 309 aa22.71■■□□□ 1.23
SMURF1-202ENST00000361368 TERF1P54274 439 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 KRT25Q7Z3Z0 450 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 CCDC122Q5T0U0 273 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 NSMCE1Q8WV22 266 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 PKNOX2Q96KN3 472 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 LZTFL1Q9NQ48 299 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 TLDC2A0PJX2 215 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 CCNT1O60563 726 aaKnown RBP22.7■■□□□ 1.22
SMURF1-202ENST00000361368 ERCC6LQ2NKX8 1250 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 MYCLP12524 364 aaPredicted RBP22.7■■□□□ 1.22
SMURF1-202ENST00000361368 ADCY7P51828 1080 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 FAM89AQ96GI7 184 aa22.7■■□□□ 1.22
SMURF1-202ENST00000361368 TBC1D8BQ0IIM8 1120 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 UBL4BQ8N7F7 174 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 ASXL2Q76L83 1435 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 GEN1Q17RS7 908 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 AFAP1L2Q8N4X5 818 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 APPBP2Q92624 585 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 KRT9P35527 623 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 LLPHQ9BRT6 129 aaKnown RBP22.69■■□□□ 1.22
SMURF1-202ENST00000361368 ZMYND15Q9H091 742 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 SLC5A4Q9NY91 659 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 SLC1A4P43007 532 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 FAM160A1Q05DH4 1040 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 TBC1D22AQ8WUA7 517 aa22.69■■□□□ 1.22
SMURF1-202ENST00000361368 ZBTB24O43167 697 aaPredicted RBP22.68■■□□□ 1.22
SMURF1-202ENST00000361368 ACTN4O43707 911 aaKnown RBP22.68■■□□□ 1.22
SMURF1-202ENST00000361368 NACA2Q9H009 215 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 SMIM23A6NLE4 172 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 ZNF790Q6PG37 636 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 CTNND2Q9UQB3 1225 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 B4E1Z4 1266 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 KARSQ15046 597 aaKnown RBP22.68■■□□□ 1.22
SMURF1-202ENST00000361368 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 TBC1D31Q96DN5 1066 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 SEC62Q99442 399 aaKnown RBP22.68■■□□□ 1.22
SMURF1-202ENST00000361368 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 ARMT1Q9H993 441 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 RSPH14Q9UHP6 348 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 ASIC2Q16515 512 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 PIK3AP1Q6ZUJ8 805 aa22.68■■□□□ 1.22
SMURF1-202ENST00000361368 ALDH1B1P30837 517 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 NONOQ15233 471 aaKnown RBP eCLIP22.67■■□□□ 1.22
SMURF1-202ENST00000361368 NIM1KQ8IY84 436 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 RPS6KB1P23443 525 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 PPP1R21Q6ZMI0 780 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 PFDN4Q9NQP4 134 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
SMURF1-202ENST00000361368 GIPC1O14908 333 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 ZNF365Q70YC5 407 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 NUP58Q9BVL2 599 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 XAGE2Q96GT9 111 aa22.67■■□□□ 1.22
SMURF1-202ENST00000361368 ZNF830Q96NB3 372 aaPredicted RBP22.67■■□□□ 1.22
SMURF1-202ENST00000361368 NCAPH2Q6IBW4 605 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 LPIN2Q92539 896 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 ZRANB1Q9UGI0 708 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 BAG1Q99933 345 aaPredicted RBP22.66■■□□□ 1.22
SMURF1-202ENST00000361368 ANGEL1Q9UNK9 670 aaKnown RBP22.66■■□□□ 1.22
SMURF1-202ENST00000361368 TBX22Q9Y458 520 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 BIRC2Q13490 618 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 TUBB2AQ13885 445 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 TRERF1Q96PN7 1200 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 TUBB2BQ9BVA1 445 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 DNM3Q9UQ16 869 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 SPC25Q9HBM1 224 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 CCDC160A6NGH7 325 aa22.66■■□□□ 1.22
SMURF1-202ENST00000361368 EBAG9O00559 213 aa22.65■■□□□ 1.22
SMURF1-202ENST00000361368 IRX3P78415 501 aaPredicted RBP22.65■■□□□ 1.22
SMURF1-202ENST00000361368 VPS52Q8N1B4 723 aa22.65■■□□□ 1.22
SMURF1-202ENST00000361368 UBLCP1Q8WVY7 318 aaPredicted RBP22.65■■□□□ 1.22
SMURF1-202ENST00000361368 PROCA1Q8NCQ7 364 aaPredicted RBP22.65■■□□□ 1.22
SMURF1-202ENST00000361368 PRPF31Q8WWY3 499 aaKnown RBP22.65■■□□□ 1.22
SMURF1-202ENST00000361368 MROH5Q6ZUA9 1318 aa22.65■■□□□ 1.22
SMURF1-202ENST00000361368 TXKP42681 527 aa22.65■■□□□ 1.22
SMURF1-202ENST00000361368 GINS2Q9Y248 185 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms